Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AP005117.1-201ENST00000584346 1413 ntBASIC18.66■□□□□ 0.58
BEST1O76090 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BEST1O76090 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
BEST1O76090 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.65■□□□□ 0.58
BEST1O76090 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.65■□□□□ 0.58
BEST1O76090 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST1O76090 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST1O76090 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.65■□□□□ 0.58
BEST1O76090 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST1O76090 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
BEST1O76090 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST1O76090 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BEST1O76090 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.65■□□□□ 0.58
BEST1O76090 FAAHP1-202ENST00000446499 1238 ntBASIC18.65■□□□□ 0.58
BEST1O76090 AC106795.1-205ENST00000512851 1056 ntBASIC18.65■□□□□ 0.58
BEST1O76090 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.65■□□□□ 0.58
BEST1O76090 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BEST1O76090 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.65■□□□□ 0.58
BEST1O76090 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
BEST1O76090 AL121912.1-201ENST00000603683 238 ntBASIC18.65■□□□□ 0.58
BEST1O76090 AD001527.2-201ENST00000622994 785 ntBASIC18.65■□□□□ 0.58
BEST1O76090 TP73-AS1-207ENST00000624167 988 ntBASIC18.65■□□□□ 0.58
BEST1O76090 AP000867.4-201ENST00000641616 219 ntBASIC18.65■□□□□ 0.58
BEST1O76090 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST1O76090 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BEST1O76090 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
BEST1O76090 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.65■□□□□ 0.58
BEST1O76090 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
BEST1O76090 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
BEST1O76090 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BEST1O76090 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST1O76090 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST1O76090 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
BEST1O76090 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
BEST1O76090 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
BEST1O76090 AL133373.2-201ENST00000623187 2828 ntBASIC18.64■□□□□ 0.58
BEST1O76090 AL049757.1-201ENST00000616842 1596 ntBASIC18.64■□□□□ 0.58
BEST1O76090 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BEST1O76090 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST1O76090 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.64■□□□□ 0.57
BEST1O76090 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BEST1O76090 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.64■□□□□ 0.57
BEST1O76090 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.64■□□□□ 0.57
BEST1O76090 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST1O76090 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST1O76090 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST1O76090 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
BEST1O76090 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.64■□□□□ 0.57
BEST1O76090 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.64■□□□□ 0.57
BEST1O76090 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
BEST1O76090 AC008608.2-201ENST00000606089 416 ntBASIC18.64■□□□□ 0.57
BEST1O76090 AC019129.2-201ENST00000609837 1235 ntBASIC18.64■□□□□ 0.57
BEST1O76090 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.64■□□□□ 0.57
BEST1O76090 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.64■□□□□ 0.57
BEST1O76090 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST1O76090 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
BEST1O76090 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
BEST1O76090 BX276092.7-203ENST00000637198 1536 ntBASIC18.64■□□□□ 0.57
BEST1O76090 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST1O76090 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BEST1O76090 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BEST1O76090 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.63■□□□□ 0.57
BEST1O76090 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.63■□□□□ 0.57
BEST1O76090 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST1O76090 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST1O76090 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST1O76090 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.63■□□□□ 0.57
BEST1O76090 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST1O76090 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST1O76090 AC026396.1-201ENST00000419388 421 ntBASIC18.63■□□□□ 0.57
BEST1O76090 FGFR3P6-201ENST00000457012 610 ntBASIC18.63■□□□□ 0.57
BEST1O76090 AC009078.2-202ENST00000463353 338 ntBASIC18.63■□□□□ 0.57
BEST1O76090 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BEST1O76090 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.63■□□□□ 0.57
BEST1O76090 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BEST1O76090 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
BEST1O76090 MTDHP3-201ENST00000594186 672 ntBASIC18.63■□□□□ 0.57
BEST1O76090 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BEST1O76090 AL355877.3-201ENST00000622820 899 ntBASIC18.63■□□□□ 0.57
BEST1O76090 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
BEST1O76090 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
BEST1O76090 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BEST1O76090 KRT8P10-201ENST00000450021 1447 ntBASIC18.63■□□□□ 0.57
BEST1O76090 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
BEST1O76090 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BEST1O76090 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
BEST1O76090 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.63■□□□□ 0.57
BEST1O76090 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
BEST1O76090 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.63■□□□□ 0.57
BEST1O76090 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST1O76090 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST1O76090 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST1O76090 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST1O76090 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BEST1O76090 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
BEST1O76090 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BEST1O76090 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.62■□□□□ 0.57
BEST1O76090 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BEST1O76090 AL160237.2-201ENST00000556165 472 ntBASIC18.62■□□□□ 0.57
BEST1O76090 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms