Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLOCKO15516 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLOCKO15516 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLOCKO15516 SDHAP2-201ENST00000455183 2001 ntBASIC16.94■□□□□ 0.3
CLOCKO15516 AL138688.1-201ENST00000624851 1594 ntBASIC16.94■□□□□ 0.3
CLOCKO15516 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CLOCKO15516 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.94■□□□□ 0.3
CLOCKO15516 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLOCKO15516 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLOCKO15516 AC099343.3-201ENST00000605834 2503 ntBASIC16.94■□□□□ 0.3
CLOCKO15516 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLOCKO15516 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLOCKO15516 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLOCKO15516 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
CLOCKO15516 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CLOCKO15516 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.94■□□□□ 0.3
CLOCKO15516 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.94■□□□□ 0.3
CLOCKO15516 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLOCKO15516 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.94■□□□□ 0.3
CLOCKO15516 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.94■□□□□ 0.3
CLOCKO15516 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.94■□□□□ 0.3
CLOCKO15516 CKBP1-201ENST00000565489 1086 ntBASIC16.94■□□□□ 0.3
CLOCKO15516 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLOCKO15516 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
CLOCKO15516 AC034236.2-201ENST00000606662 1610 ntBASIC16.94■□□□□ 0.3
CLOCKO15516 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CLOCKO15516 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLOCKO15516 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLOCKO15516 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLOCKO15516 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLOCKO15516 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.94■□□□□ 0.3
CLOCKO15516 UBALD1-205ENST00000590891 2641 ntBASIC16.94■□□□□ 0.3
CLOCKO15516 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLOCKO15516 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLOCKO15516 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CLOCKO15516 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.93■□□□□ 0.3
CLOCKO15516 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.93■□□□□ 0.3
CLOCKO15516 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.93■□□□□ 0.3
CLOCKO15516 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.93■□□□□ 0.3
CLOCKO15516 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.93■□□□□ 0.3
CLOCKO15516 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLOCKO15516 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CLOCKO15516 AL390955.1-201ENST00000428694 934 ntBASIC16.93■□□□□ 0.3
CLOCKO15516 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.93■□□□□ 0.3
CLOCKO15516 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.93■□□□□ 0.3
CLOCKO15516 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.93■□□□□ 0.3
CLOCKO15516 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.93■□□□□ 0.3
CLOCKO15516 AC097493.4-201ENST00000641197 219 ntBASIC16.93■□□□□ 0.3
CLOCKO15516 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CLOCKO15516 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.93■□□□□ 0.3
CLOCKO15516 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLOCKO15516 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.93■□□□□ 0.3
CLOCKO15516 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.93■□□□□ 0.3
CLOCKO15516 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLOCKO15516 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.93■□□□□ 0.3
CLOCKO15516 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.92■□□□□ 0.3
CLOCKO15516 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
CLOCKO15516 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.92■□□□□ 0.3
CLOCKO15516 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CLOCKO15516 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.92■□□□□ 0.3
CLOCKO15516 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
CLOCKO15516 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.92■□□□□ 0.3
CLOCKO15516 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.92■□□□□ 0.3
CLOCKO15516 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.92■□□□□ 0.3
CLOCKO15516 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLOCKO15516 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.92■□□□□ 0.3
CLOCKO15516 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.92■□□□□ 0.3
CLOCKO15516 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 MIR6786-201ENST00000616843 113 ntBASIC16.92■□□□□ 0.3
CLOCKO15516 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CLOCKO15516 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.92■□□□□ 0.3
CLOCKO15516 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CLOCKO15516 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLOCKO15516 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.92■□□□□ 0.3
CLOCKO15516 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms