Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR4O00206 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR4O00206 AC132938.6-201ENST00000623828 1655 ntBASIC17.61■□□□□ 0.41
TLR4O00206 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR4O00206 AL390961.4-201ENST00000623958 2535 ntBASIC17.61■□□□□ 0.41
TLR4O00206 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR4O00206 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR4O00206 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TLR4O00206 ESPNP-201ENST00000270691 2015 ntBASIC17.61■□□□□ 0.41
TLR4O00206 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR4O00206 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
TLR4O00206 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TLR4O00206 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TLR4O00206 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.61■□□□□ 0.41
TLR4O00206 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TLR4O00206 AC007967.3-201ENST00000434308 558 ntBASIC17.61■□□□□ 0.41
TLR4O00206 IGHV3-22-201ENST00000520721 359 ntBASIC17.61■□□□□ 0.41
TLR4O00206 AC092865.5-201ENST00000545435 363 ntBASIC17.61■□□□□ 0.41
TLR4O00206 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.61■□□□□ 0.41
TLR4O00206 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.61■□□□□ 0.41
TLR4O00206 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.61■□□□□ 0.41
TLR4O00206 NKAPP1-205ENST00000585790 367 ntBASIC17.61■□□□□ 0.41
TLR4O00206 AC025062.2-201ENST00000605477 670 ntBASIC17.61■□□□□ 0.41
TLR4O00206 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.61■□□□□ 0.41
TLR4O00206 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.61■□□□□ 0.41
TLR4O00206 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.61■□□□□ 0.41
TLR4O00206 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR4O00206 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR4O00206 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR4O00206 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.61■□□□□ 0.41
TLR4O00206 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR4O00206 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR4O00206 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR4O00206 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TLR4O00206 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TLR4O00206 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TLR4O00206 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 AC090164.3-201ENST00000610780 2143 ntBASIC17.6■□□□□ 0.41
TLR4O00206 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.6■□□□□ 0.41
TLR4O00206 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 AC135050.7-201ENST00000624508 2218 ntBASIC17.6■□□□□ 0.41
TLR4O00206 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 WIZP1-201ENST00000531444 2299 ntBASIC17.6■□□□□ 0.41
TLR4O00206 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.6■□□□□ 0.41
TLR4O00206 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.6■□□□□ 0.41
TLR4O00206 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.6■□□□□ 0.41
TLR4O00206 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.6■□□□□ 0.41
TLR4O00206 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.6■□□□□ 0.41
TLR4O00206 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TLR4O00206 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.6■□□□□ 0.41
TLR4O00206 AC145285.3-201ENST00000564603 959 ntBASIC17.6■□□□□ 0.41
TLR4O00206 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.6■□□□□ 0.41
TLR4O00206 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.6■□□□□ 0.41
TLR4O00206 AP000867.4-201ENST00000641616 219 ntBASIC17.6■□□□□ 0.41
TLR4O00206 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.6■□□□□ 0.41
TLR4O00206 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 AL031598.1-201ENST00000561511 1773 ntBASIC17.6■□□□□ 0.41
TLR4O00206 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TLR4O00206 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.6■□□□□ 0.41
TLR4O00206 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.6■□□□□ 0.41
TLR4O00206 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TLR4O00206 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TLR4O00206 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.6■□□□□ 0.41
TLR4O00206 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TLR4O00206 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TLR4O00206 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.59■□□□□ 0.41
TLR4O00206 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 AC104109.2-201ENST00000602919 1418 ntBASIC17.59■□□□□ 0.41
TLR4O00206 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.59■□□□□ 0.41
TLR4O00206 AC092910.1-201ENST00000482027 1129 ntBASIC17.59■□□□□ 0.41
TLR4O00206 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.59■□□□□ 0.41
TLR4O00206 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.59■□□□□ 0.41
TLR4O00206 AC012640.2-201ENST00000561606 901 ntBASIC17.59■□□□□ 0.41
TLR4O00206 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.59■□□□□ 0.41
TLR4O00206 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 MTDHP4-201ENST00000600287 670 ntBASIC17.59■□□□□ 0.41
TLR4O00206 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms