Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV9S1A1TA0A576 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV9S1A1TA0A576 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV9S1A1TA0A576 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV9S1A1TA0A576 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV9S1A1TA0A576 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TCRBV9S1A1TA0A576 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TCRBV9S1A1TA0A576 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.93■□□□□ 0.46
TCRBV9S1A1TA0A576 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TCRBV9S1A1TA0A576 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TCRBV9S1A1TA0A576 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 KRT89P-201ENST00000620027 1478 ntBASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV9S1A1TA0A576 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 GCSHP2-201ENST00000560971 527 ntBASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 AC024563.2-201ENST00000603282 481 ntBASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TCRBV9S1A1TA0A576 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV9S1A1TA0A576 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.89■□□□□ 0.46
TCRBV9S1A1TA0A576 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
TCRBV9S1A1TA0A576 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.89■□□□□ 0.45
TCRBV9S1A1TA0A576 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms