Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ndc1Q8VCB1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ndc1Q8VCB1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ndc1Q8VCB1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ndc1Q8VCB1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.99■□□□□ 0.95
Ndc1Q8VCB1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ndc1Q8VCB1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ndc1Q8VCB1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ndc1Q8VCB1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ndc1Q8VCB1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ndc1Q8VCB1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ndc1Q8VCB1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ndc1Q8VCB1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ndc1Q8VCB1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ndc1Q8VCB1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ndc1Q8VCB1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ndc1Q8VCB1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ndc1Q8VCB1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ndc1Q8VCB1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ndc1Q8VCB1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ndc1Q8VCB1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ndc1Q8VCB1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ndc1Q8VCB1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ndc1Q8VCB1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ndc1Q8VCB1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ndc1Q8VCB1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ndc1Q8VCB1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ndc1Q8VCB1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ndc1Q8VCB1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ndc1Q8VCB1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.93■□□□□ 0.94
Ndc1Q8VCB1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ndc1Q8VCB1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ndc1Q8VCB1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Ndc1Q8VCB1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ndc1Q8VCB1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ndc1Q8VCB1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ndc1Q8VCB1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.91■□□□□ 0.94
Ndc1Q8VCB1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ndc1Q8VCB1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ndc1Q8VCB1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ndc1Q8VCB1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ndc1Q8VCB1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ndc1Q8VCB1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ndc1Q8VCB1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ndc1Q8VCB1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ndc1Q8VCB1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.9■□□□□ 0.94
Ndc1Q8VCB1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ndc1Q8VCB1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ndc1Q8VCB1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ndc1Q8VCB1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ndc1Q8VCB1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ndc1Q8VCB1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ndc1Q8VCB1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ndc1Q8VCB1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.89■□□□□ 0.93
Ndc1Q8VCB1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ndc1Q8VCB1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ndc1Q8VCB1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.88■□□□□ 0.93
Ndc1Q8VCB1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ndc1Q8VCB1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ndc1Q8VCB1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ndc1Q8VCB1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.86■□□□□ 0.93
Ndc1Q8VCB1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ndc1Q8VCB1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ndc1Q8VCB1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ndc1Q8VCB1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ndc1Q8VCB1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ndc1Q8VCB1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ndc1Q8VCB1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ndc1Q8VCB1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ndc1Q8VCB1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ndc1Q8VCB1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ndc1Q8VCB1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ndc1Q8VCB1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ndc1Q8VCB1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ndc1Q8VCB1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ndc1Q8VCB1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.83■□□□□ 0.93
Ndc1Q8VCB1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ndc1Q8VCB1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ndc1Q8VCB1 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.83■□□□□ 0.93
Ndc1Q8VCB1 Gm5921-201ENSMUST00000075898 882 ntBASIC20.83■□□□□ 0.93
Ndc1Q8VCB1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ndc1Q8VCB1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ndc1Q8VCB1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ndc1Q8VCB1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ndc1Q8VCB1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ndc1Q8VCB1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ndc1Q8VCB1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ndc1Q8VCB1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ndc1Q8VCB1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ndc1Q8VCB1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ndc1Q8VCB1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ndc1Q8VCB1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.81■□□□□ 0.92
Ndc1Q8VCB1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ndc1Q8VCB1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ndc1Q8VCB1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ndc1Q8VCB1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ndc1Q8VCB1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ndc1Q8VCB1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
Ndc1Q8VCB1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ndc1Q8VCB1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms