Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Notch3Q61982 Rps24-207ENSMUST00000224568 714 ntBASIC16.96■□□□□ 0.3
Notch3Q61982 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Notch3Q61982 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Notch3Q61982 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Notch3Q61982 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Notch3Q61982 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Notch3Q61982 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Notch3Q61982 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Notch3Q61982 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.94■□□□□ 0.3
Notch3Q61982 Gm43566-201ENSMUST00000196851 808 ntBASIC16.94■□□□□ 0.3
Notch3Q61982 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Notch3Q61982 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Notch3Q61982 Gm44428-201ENSMUST00000204474 874 ntBASIC16.93■□□□□ 0.3
Notch3Q61982 Gm45102-201ENSMUST00000207427 857 ntBASIC16.93■□□□□ 0.3
Notch3Q61982 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.93■□□□□ 0.3
Notch3Q61982 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Notch3Q61982 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Notch3Q61982 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Notch3Q61982 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Notch3Q61982 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.92■□□□□ 0.3
Notch3Q61982 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.92■□□□□ 0.3
Notch3Q61982 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Notch3Q61982 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Notch3Q61982 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Notch3Q61982 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Notch3Q61982 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Notch3Q61982 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.91■□□□□ 0.3
Notch3Q61982 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Notch3Q61982 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.9■□□□□ 0.3
Notch3Q61982 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Notch3Q61982 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Notch3Q61982 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.9■□□□□ 0.3
Notch3Q61982 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Notch3Q61982 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Notch3Q61982 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Notch3Q61982 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Notch3Q61982 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Notch3Q61982 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Notch3Q61982 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Notch3Q61982 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Notch3Q61982 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Notch3Q61982 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Notch3Q61982 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Notch3Q61982 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.88■□□□□ 0.29
Notch3Q61982 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Notch3Q61982 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.87■□□□□ 0.29
Notch3Q61982 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Notch3Q61982 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Notch3Q61982 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Notch3Q61982 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Notch3Q61982 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.87■□□□□ 0.29
Notch3Q61982 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Notch3Q61982 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Notch3Q61982 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.86■□□□□ 0.29
Notch3Q61982 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Notch3Q61982 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Notch3Q61982 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.85■□□□□ 0.29
Notch3Q61982 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Notch3Q61982 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Notch3Q61982 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Notch3Q61982 Gm9959-201ENSMUST00000068277 390 ntBASIC16.85■□□□□ 0.29
Notch3Q61982 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Notch3Q61982 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Notch3Q61982 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Notch3Q61982 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Notch3Q61982 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Notch3Q61982 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Notch3Q61982 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Notch3Q61982 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.84■□□□□ 0.29
Notch3Q61982 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Notch3Q61982 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Notch3Q61982 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Notch3Q61982 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Notch3Q61982 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Notch3Q61982 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Notch3Q61982 Gm14117-201ENSMUST00000122417 843 ntBASIC16.83■□□□□ 0.28
Notch3Q61982 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Notch3Q61982 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Notch3Q61982 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Notch3Q61982 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Notch3Q61982 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Notch3Q61982 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Notch3Q61982 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Notch3Q61982 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Notch3Q61982 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Notch3Q61982 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Notch3Q61982 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.81■□□□□ 0.28
Notch3Q61982 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Notch3Q61982 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Notch3Q61982 Gm15820-201ENSMUST00000201566 728 ntBASIC16.81■□□□□ 0.28
Notch3Q61982 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Notch3Q61982 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Notch3Q61982 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Notch3Q61982 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Notch3Q61982 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.8■□□□□ 0.28
Notch3Q61982 Gm45444-201ENSMUST00000211394 898 ntBASIC16.8■□□□□ 0.28
Notch3Q61982 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Notch3Q61982 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.8■□□□□ 0.28
Notch3Q61982 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms