Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 SWD1YAR003W 1281 nt7.93□□□□□ -1.14
BRE1Q07457 RDN5-3RDN5-3 119 nt7.93□□□□□ -1.14
BRE1Q07457 RDN5-4RDN5-4 119 nt7.93□□□□□ -1.14
BRE1Q07457 RDN5-5RDN5-5 119 nt7.93□□□□□ -1.14
BRE1Q07457 LSC1YOR142W 990 nt7.93□□□□□ -1.14
BRE1Q07457 BUD9YGR041W 1644 nt7.92□□□□□ -1.14
BRE1Q07457 YDL177CYDL177C 513 nt7.92□□□□□ -1.14
BRE1Q07457 YKL018C-AYKL018C-A 300 nt7.92□□□□□ -1.14
BRE1Q07457 TMA46YOR091W 1038 nt7.92□□□□□ -1.14
BRE1Q07457 YTH1YPR107C 627 nt7.92□□□□□ -1.14
BRE1Q07457 TOS2YGR221C 1869 nt7.92□□□□□ -1.14
BRE1Q07457 YSC83YHR017W 1158 nt7.91□□□□□ -1.14
BRE1Q07457 ASF1YJL115W 840 nt7.91□□□□□ -1.14
BRE1Q07457 RMA1YKL132C 1293 nt7.91□□□□□ -1.14
BRE1Q07457 HSM3YBR272C 1443 nt7.91□□□□□ -1.14
BRE1Q07457 YFR006WYFR006W 1608 nt7.91□□□□□ -1.14
BRE1Q07457 DOT1YDR440W 1749 nt7.91□□□□□ -1.14
BRE1Q07457 HXT13YEL069C 1695 nt7.9□□□□□ -1.14
BRE1Q07457 YKL102CYKL102C 306 nt7.9□□□□□ -1.14
BRE1Q07457 YBR113WYBR113W 483 nt7.9□□□□□ -1.14
BRE1Q07457 MKK1YOR231W 1527 nt7.89□□□□□ -1.15
BRE1Q07457 YBR241CYBR241C 1467 nt7.89□□□□□ -1.15
BRE1Q07457 HHY1YEL059W 309 nt7.89□□□□□ -1.15
BRE1Q07457 YNL092WYNL092W 1203 nt7.89□□□□□ -1.15
BRE1Q07457 HBN1YCL026C-B 582 nt7.89□□□□□ -1.15
BRE1Q07457 YHR020WYHR020W 2067 nt7.88□□□□□ -1.15
BRE1Q07457 GAA1YLR088W 1845 nt7.88□□□□□ -1.15
BRE1Q07457 FMO1YHR176W 1299 nt7.88□□□□□ -1.15
BRE1Q07457 YKL077WYKL077W 1179 nt7.88□□□□□ -1.15
BRE1Q07457 TAF9YMR236W 474 nt7.88□□□□□ -1.15
BRE1Q07457 AGP2YBR132C 1791 nt7.88□□□□□ -1.15
BRE1Q07457 RGD2YFL047W 2145 nt7.88□□□□□ -1.15
BRE1Q07457 PPM2YOL141W 2088 nt7.88□□□□□ -1.15
BRE1Q07457 SAL1YNL083W 1485 nt7.87□□□□□ -1.15
BRE1Q07457 YFL013W-AYFL013W-A 804 nt7.87□□□□□ -1.15
BRE1Q07457 TAH11YJR046W 1815 nt7.87□□□□□ -1.15
BRE1Q07457 GYP8YFL027C 1494 nt7.87□□□□□ -1.15
BRE1Q07457 SPS22YCL048W 1392 nt7.86□□□□□ -1.15
BRE1Q07457 RNH1YMR234W 1047 nt7.86□□□□□ -1.15
BRE1Q07457 MRPS18YNL306W 654 nt7.86□□□□□ -1.15
BRE1Q07457 ILV6YCL009C 930 nt7.86□□□□□ -1.15
BRE1Q07457 CYB2YML054C 1776 nt7.86□□□□□ -1.15
BRE1Q07457 YIL029W-AYIL029W-A 372 nt7.85□□□□□ -1.15
BRE1Q07457 COQ1YBR003W 1422 nt7.85□□□□□ -1.15
BRE1Q07457 CCT3YJL014W 1605 nt7.85□□□□□ -1.15
BRE1Q07457 YBL070CYBL070C 321 nt7.84□□□□□ -1.15
BRE1Q07457 IRC11YOR013W 471 nt7.84□□□□□ -1.15
BRE1Q07457 YFL052WYFL052W 1398 nt7.84□□□□□ -1.16
BRE1Q07457 YGR068W-AYGR068W-A 96 nt7.83□□□□□ -1.16
BRE1Q07457 ATG36YJL185C 882 nt7.83□□□□□ -1.16
BRE1Q07457 MRPL23YOR150W 492 nt7.83□□□□□ -1.16
BRE1Q07457 CMR1YDL156W 1569 nt7.82□□□□□ -1.16
BRE1Q07457 AIM20YIL158W 615 nt7.82□□□□□ -1.16
BRE1Q07457 NTG1YAL015C 1200 nt7.82□□□□□ -1.16
BRE1Q07457 OPT1YJL212C 2400 nt7.81□□□□□ -1.16
BRE1Q07457 IMG1YCR046C 510 nt7.81□□□□□ -1.16
BRE1Q07457 GCG1YER163C 699 nt7.81□□□□□ -1.16
BRE1Q07457 YRB2YIL063C 984 nt7.81□□□□□ -1.16
BRE1Q07457 PUS5YLR165C 765 nt7.81□□□□□ -1.16
BRE1Q07457 SGE1YPR198W 1632 nt7.81□□□□□ -1.16
BRE1Q07457 YHK8YHR048W 1545 nt7.8□□□□□ -1.16
BRE1Q07457 YEL009C-AYEL009C-A 408 nt7.8□□□□□ -1.16
BRE1Q07457 SRY1YKL218C 981 nt7.8□□□□□ -1.16
BRE1Q07457 YNR014WYNR014W 639 nt7.8□□□□□ -1.16
BRE1Q07457 COX10YPL172C 1389 nt7.8□□□□□ -1.16
BRE1Q07457 STT3YGL022W 2157 nt7.8□□□□□ -1.16
BRE1Q07457 SRF1YDL133W 1314 nt7.79□□□□□ -1.16
BRE1Q07457 RSC2YLR357W 2670 nt7.79□□□□□ -1.16
BRE1Q07457 CDC13YDL220C 2775 nt7.79□□□□□ -1.16
BRE1Q07457 tG(GCC)BtG(GCC)B 71 nt7.79□□□□□ -1.16
BRE1Q07457 SUF16tG(GCC)C 71 nt7.79□□□□□ -1.16
BRE1Q07457 tG(GCC)D1tG(GCC)D1 71 nt7.79□□□□□ -1.16
BRE1Q07457 tG(GCC)D2tG(GCC)D2 71 nt7.79□□□□□ -1.16
BRE1Q07457 tG(GCC)EtG(GCC)E 71 nt7.79□□□□□ -1.16
BRE1Q07457 SUF20tG(GCC)F1 71 nt7.79□□□□□ -1.16
BRE1Q07457 tG(GCC)F2tG(GCC)F2 71 nt7.79□□□□□ -1.16
BRE1Q07457 tG(GCC)G1tG(GCC)G1 71 nt7.79□□□□□ -1.16
BRE1Q07457 tG(GCC)G2tG(GCC)G2 71 nt7.79□□□□□ -1.16
BRE1Q07457 tG(GCC)J1tG(GCC)J1 71 nt7.79□□□□□ -1.16
BRE1Q07457 SUF23tG(GCC)J2 71 nt7.79□□□□□ -1.16
BRE1Q07457 tG(GCC)MtG(GCC)M 71 nt7.79□□□□□ -1.16
BRE1Q07457 tG(GCC)O1tG(GCC)O1 71 nt7.79□□□□□ -1.16
BRE1Q07457 SUF17tG(GCC)O2 71 nt7.79□□□□□ -1.16
BRE1Q07457 tG(GCC)P1tG(GCC)P1 71 nt7.79□□□□□ -1.16
BRE1Q07457 tG(GCC)P2tG(GCC)P2 71 nt7.79□□□□□ -1.16
BRE1Q07457 FHN1YGR131W 525 nt7.79□□□□□ -1.16
BRE1Q07457 TFC6YDR362C 2019 nt7.79□□□□□ -1.16
BRE1Q07457 GSH1YJL101C 2037 nt7.79□□□□□ -1.16
BRE1Q07457 SLA2YNL243W 2907 nt7.79□□□□□ -1.16
BRE1Q07457 YHR213W-BYHR213W-B 300 nt7.78□□□□□ -1.16
BRE1Q07457 COX16YJL003W 357 nt7.78□□□□□ -1.16
BRE1Q07457 HMS2YJR147W 1077 nt7.78□□□□□ -1.16
BRE1Q07457 YKL153WYKL153W 510 nt7.78□□□□□ -1.16
BRE1Q07457 YAR064WYAR064W 300 nt7.78□□□□□ -1.16
BRE1Q07457 ATO2YNR002C 849 nt7.78□□□□□ -1.16
BRE1Q07457 GUF1YLR289W 1938 nt7.78□□□□□ -1.16
BRE1Q07457 ELP3YPL086C 1674 nt7.77□□□□□ -1.17
BRE1Q07457 PMP3YDR276C 168 nt7.77□□□□□ -1.17
BRE1Q07457 OM45YIL136W 1182 nt7.77□□□□□ -1.17
BRE1Q07457 CDC11YJR076C 1248 nt7.77□□□□□ -1.17
Retrieved 100 of 7,029 protein–RNA pairs in 39.6 ms