Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 MPE1YKL059C 1326 nt6.01□□□□□ -1.45
LSM1P47017 TUB1YML085C 1344 nt6.01□□□□□ -1.45
LSM1P47017 YPR204WYPR204W 3099 nt6.01□□□□□ -1.45
LSM1P47017 YDR387CYDR387C 1668 nt6.01□□□□□ -1.45
LSM1P47017 YPQ2YDR352W 954 nt6□□□□□ -1.45
LSM1P47017 DUS4YLR405W 1104 nt6□□□□□ -1.45
LSM1P47017 YML6YML025C 861 nt6□□□□□ -1.45
LSM1P47017 QNS1YHR074W 2145 nt5.99□□□□□ -1.45
LSM1P47017 RIX7YLL034C 2514 nt5.99□□□□□ -1.45
LSM1P47017 BZZ1YHR114W 1902 nt5.99□□□□□ -1.45
LSM1P47017 LDB19YOR322C 2457 nt5.99□□□□□ -1.45
LSM1P47017 COX9YDL067C 180 nt5.98□□□□□ -1.45
LSM1P47017 OAC1YKL120W 975 nt5.98□□□□□ -1.45
LSM1P47017 ADE1YAR015W 921 nt5.98□□□□□ -1.45
LSM1P47017 SKN1YGR143W 2316 nt5.98□□□□□ -1.45
LSM1P47017 RTC4YNL254C 1206 nt5.97□□□□□ -1.45
LSM1P47017 ATP23YNR020C 813 nt5.97□□□□□ -1.45
LSM1P47017 YMR034CYMR034C 1305 nt5.97□□□□□ -1.45
LSM1P47017 NFS1YCL017C 1494 nt5.96□□□□□ -1.45
LSM1P47017 TOS6YNL300W 309 nt5.96□□□□□ -1.46
LSM1P47017 MSS1YMR023C 1581 nt5.96□□□□□ -1.46
LSM1P47017 ESC8YOL017W 2145 nt5.96□□□□□ -1.46
LSM1P47017 PCS60YBR222C 1632 nt5.96□□□□□ -1.46
LSM1P47017 PAT1YCR077C 2391 nt5.95□□□□□ -1.46
LSM1P47017 MRP1YDR347W 966 nt5.95□□□□□ -1.46
LSM1P47017 YDR415CYDR415C 1125 nt5.95□□□□□ -1.46
LSM1P47017 HSP150YJL159W 1242 nt5.95□□□□□ -1.46
LSM1P47017 YML133CYML133C 4125 nt5.95□□□□□ -1.46
LSM1P47017 PUP1YOR157C 786 nt5.95□□□□□ -1.46
LSM1P47017 LSG1YGL099W 1923 nt5.95□□□□□ -1.46
LSM1P47017 IRS4YKR019C 1848 nt5.95□□□□□ -1.46
LSM1P47017 YDL177CYDL177C 513 nt5.94□□□□□ -1.46
LSM1P47017 HAS1YMR290C 1518 nt5.94□□□□□ -1.46
LSM1P47017 DUG1YFR044C 1446 nt5.93□□□□□ -1.46
LSM1P47017 GPI11YDR302W 660 nt5.93□□□□□ -1.46
LSM1P47017 URH1YDR400W 1023 nt5.93□□□□□ -1.46
LSM1P47017 PTC7YHR076W 1032 nt5.93□□□□□ -1.46
LSM1P47017 AFG1YEL052W 1530 nt5.93□□□□□ -1.46
LSM1P47017 DML1YMR211W 1428 nt5.92□□□□□ -1.46
LSM1P47017 NAS6YGR232W 687 nt5.92□□□□□ -1.46
LSM1P47017 ERG10YPL028W 1197 nt5.92□□□□□ -1.46
LSM1P47017 PMT3YOR321W 2262 nt5.91□□□□□ -1.46
LSM1P47017 YDR514CYDR514C 1452 nt5.91□□□□□ -1.46
LSM1P47017 TRS31YDR472W 852 nt5.91□□□□□ -1.46
LSM1P47017 SUB2YDL084W 1341 nt5.91□□□□□ -1.46
LSM1P47017 IMA2YOL157C 1770 nt5.9□□□□□ -1.46
LSM1P47017 DOC1YGL240W 753 nt5.9□□□□□ -1.46
LSM1P47017 GET4YOR164C 939 nt5.9□□□□□ -1.46
LSM1P47017 PLB2YMR006C 2121 nt5.9□□□□□ -1.47
LSM1P47017 TRP5YGL026C 2124 nt5.89□□□□□ -1.47
LSM1P47017 YSC83YHR017W 1158 nt5.89□□□□□ -1.47
LSM1P47017 CBR1YIL043C 855 nt5.89□□□□□ -1.47
LSM1P47017 ATG36YJL185C 882 nt5.89□□□□□ -1.47
LSM1P47017 YNL092WYNL092W 1203 nt5.89□□□□□ -1.47
LSM1P47017 RPS28AYOR167C 204 nt5.89□□□□□ -1.47
LSM1P47017 MOD5YOR274W 1287 nt5.89□□□□□ -1.47
LSM1P47017 YPT1YFL038C 621 nt5.88□□□□□ -1.47
LSM1P47017 YAL016C-AYAL016C-A 315 nt5.88□□□□□ -1.47
LSM1P47017 REC107YJR021C 945 nt5.88□□□□□ -1.47
LSM1P47017 RPL31BYLR406C 342 nt5.88□□□□□ -1.47
LSM1P47017 SPG5YMR191W 1122 nt5.88□□□□□ -1.47
LSM1P47017 IRC11YOR013W 471 nt5.88□□□□□ -1.47
LSM1P47017 CRP1YHR146W 1398 nt5.88□□□□□ -1.47
LSM1P47017 tG(GCC)BtG(GCC)B 71 nt5.87□□□□□ -1.47
LSM1P47017 SUF16tG(GCC)C 71 nt5.87□□□□□ -1.47
LSM1P47017 tG(GCC)D1tG(GCC)D1 71 nt5.87□□□□□ -1.47
LSM1P47017 tG(GCC)D2tG(GCC)D2 71 nt5.87□□□□□ -1.47
LSM1P47017 tG(GCC)EtG(GCC)E 71 nt5.87□□□□□ -1.47
LSM1P47017 SUF20tG(GCC)F1 71 nt5.87□□□□□ -1.47
LSM1P47017 tG(GCC)F2tG(GCC)F2 71 nt5.87□□□□□ -1.47
LSM1P47017 tG(GCC)G1tG(GCC)G1 71 nt5.87□□□□□ -1.47
LSM1P47017 tG(GCC)G2tG(GCC)G2 71 nt5.87□□□□□ -1.47
LSM1P47017 tG(GCC)J1tG(GCC)J1 71 nt5.87□□□□□ -1.47
LSM1P47017 SUF23tG(GCC)J2 71 nt5.87□□□□□ -1.47
LSM1P47017 tG(GCC)MtG(GCC)M 71 nt5.87□□□□□ -1.47
LSM1P47017 tG(GCC)O1tG(GCC)O1 71 nt5.87□□□□□ -1.47
LSM1P47017 SUF17tG(GCC)O2 71 nt5.87□□□□□ -1.47
LSM1P47017 tG(GCC)P1tG(GCC)P1 71 nt5.87□□□□□ -1.47
LSM1P47017 tG(GCC)P2tG(GCC)P2 71 nt5.87□□□□□ -1.47
LSM1P47017 YBR124WYBR124W 360 nt5.87□□□□□ -1.47
LSM1P47017 HEM1YDR232W 1647 nt5.87□□□□□ -1.47
LSM1P47017 PPM2YOL141W 2088 nt5.87□□□□□ -1.47
LSM1P47017 MTC5YDR128W 3447 nt5.86□□□□□ -1.47
LSM1P47017 UTR2YEL040W 1404 nt5.86□□□□□ -1.47
LSM1P47017 YLR358CYLR358C 564 nt5.86□□□□□ -1.47
LSM1P47017 NTG2YOL043C 1143 nt5.86□□□□□ -1.47
LSM1P47017 EMW1YNL313C 2715 nt5.86□□□□□ -1.47
LSM1P47017 PRY3YJL078C 2646 nt5.85□□□□□ -1.47
LSM1P47017 SHO1YER118C 1104 nt5.85□□□□□ -1.47
LSM1P47017 PYK2YOR347C 1521 nt5.84□□□□□ -1.47
LSM1P47017 YIA6YIL006W 1122 nt5.84□□□□□ -1.47
LSM1P47017 FUS3YBL016W 1062 nt5.84□□□□□ -1.47
LSM1P47017 YNR005CYNR005C 405 nt5.84□□□□□ -1.47
LSM1P47017 HTZ1YOL012C 405 nt5.84□□□□□ -1.47
LSM1P47017 YMR279CYMR279C 1623 nt5.84□□□□□ -1.47
LSM1P47017 MRC1YCL061C 3291 nt5.84□□□□□ -1.48
LSM1P47017 EDE1YBL047C 4146 nt5.83□□□□□ -1.48
LSM1P47017 YHR020WYHR020W 2067 nt5.83□□□□□ -1.48
LSM1P47017 STE13YOR219C 2796 nt5.83□□□□□ -1.48
LSM1P47017 tL(UAA)B1tL(UAA)B1 84 nt5.83□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 30.5 ms