Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 RMD9YGL107C 1941 nt6.56□□□□□ -1.36
TDA11P38854 YLL058WYLL058W 1728 nt6.56□□□□□ -1.36
TDA11P38854 ZIM17YNL310C 525 nt6.56□□□□□ -1.36
TDA11P38854 ATG22YCL038C 1587 nt6.56□□□□□ -1.36
TDA11P38854 CRP1YHR146W 1398 nt6.56□□□□□ -1.36
TDA11P38854 RSA4YCR072C 1548 nt6.55□□□□□ -1.36
TDA11P38854 YDL177CYDL177C 513 nt6.55□□□□□ -1.36
TDA11P38854 YPT1YFL038C 621 nt6.55□□□□□ -1.36
TDA11P38854 CBR1YIL043C 855 nt6.55□□□□□ -1.36
TDA11P38854 UTR2YEL040W 1404 nt6.55□□□□□ -1.36
TDA11P38854 tG(GCC)BtG(GCC)B 71 nt6.54□□□□□ -1.36
TDA11P38854 SUF16tG(GCC)C 71 nt6.54□□□□□ -1.36
TDA11P38854 tG(GCC)D1tG(GCC)D1 71 nt6.54□□□□□ -1.36
TDA11P38854 tG(GCC)D2tG(GCC)D2 71 nt6.54□□□□□ -1.36
TDA11P38854 tG(GCC)EtG(GCC)E 71 nt6.54□□□□□ -1.36
TDA11P38854 SUF20tG(GCC)F1 71 nt6.54□□□□□ -1.36
TDA11P38854 tG(GCC)F2tG(GCC)F2 71 nt6.54□□□□□ -1.36
TDA11P38854 tG(GCC)G1tG(GCC)G1 71 nt6.54□□□□□ -1.36
TDA11P38854 tG(GCC)G2tG(GCC)G2 71 nt6.54□□□□□ -1.36
TDA11P38854 tG(GCC)J1tG(GCC)J1 71 nt6.54□□□□□ -1.36
TDA11P38854 SUF23tG(GCC)J2 71 nt6.54□□□□□ -1.36
TDA11P38854 tG(GCC)MtG(GCC)M 71 nt6.54□□□□□ -1.36
TDA11P38854 tG(GCC)O1tG(GCC)O1 71 nt6.54□□□□□ -1.36
TDA11P38854 SUF17tG(GCC)O2 71 nt6.54□□□□□ -1.36
TDA11P38854 tG(GCC)P1tG(GCC)P1 71 nt6.54□□□□□ -1.36
TDA11P38854 tG(GCC)P2tG(GCC)P2 71 nt6.54□□□□□ -1.36
TDA11P38854 ESC8YOL017W 2145 nt6.53□□□□□ -1.36
TDA11P38854 QCR6YFR033C 444 nt6.53□□□□□ -1.36
TDA11P38854 YSC83YHR017W 1158 nt6.53□□□□□ -1.36
TDA11P38854 OAC1YKL120W 975 nt6.53□□□□□ -1.36
TDA11P38854 MOD5YOR274W 1287 nt6.53□□□□□ -1.36
TDA11P38854 NME1NME1 340 nt6.53□□□□□ -1.36
TDA11P38854 YBR113WYBR113W 483 nt6.53□□□□□ -1.36
TDA11P38854 PFK2YMR205C 2880 nt6.53□□□□□ -1.36
TDA11P38854 GPI11YDR302W 660 nt6.52□□□□□ -1.37
TDA11P38854 YGR127WYGR127W 939 nt6.52□□□□□ -1.37
TDA11P38854 PRS4YBL068W 981 nt6.52□□□□□ -1.37
TDA11P38854 YDR514CYDR514C 1452 nt6.52□□□□□ -1.37
TDA11P38854 YHR131CYHR131C 2553 nt6.51□□□□□ -1.37
TDA11P38854 COX9YDL067C 180 nt6.51□□□□□ -1.37
TDA11P38854 ERP2YAL007C 648 nt6.51□□□□□ -1.37
TDA11P38854 FBA1YKL060C 1080 nt6.51□□□□□ -1.37
TDA11P38854 VHT1YGR065C 1782 nt6.51□□□□□ -1.37
TDA11P38854 CBK1YNL161W 2271 nt6.51□□□□□ -1.37
TDA11P38854 STB5YHR178W 2232 nt6.5□□□□□ -1.37
TDA11P38854 AIM46YHR199C 933 nt6.5□□□□□ -1.37
TDA11P38854 SPG5YMR191W 1122 nt6.5□□□□□ -1.37
TDA11P38854 RTC4YNL254C 1206 nt6.5□□□□□ -1.37
TDA11P38854 NFS1YCL017C 1494 nt6.49□□□□□ -1.37
TDA11P38854 LGE1YPL055C 999 nt6.49□□□□□ -1.37
TDA11P38854 PAB1YER165W 1734 nt6.49□□□□□ -1.37
TDA11P38854 KEL1YHR158C 3495 nt6.49□□□□□ -1.37
TDA11P38854 TRR2YHR106W 1029 nt6.48□□□□□ -1.37
TDA11P38854 YML122CYML122C 381 nt6.48□□□□□ -1.37
TDA11P38854 MPH3YJR160C 1809 nt6.48□□□□□ -1.37
TDA11P38854 YDR387CYDR387C 1668 nt6.47□□□□□ -1.37
TDA11P38854 YIP4YGL198W 708 nt6.47□□□□□ -1.37
TDA11P38854 RPL31BYLR406C 342 nt6.47□□□□□ -1.37
TDA11P38854 SML1YML058W 315 nt6.47□□□□□ -1.37
TDA11P38854 ASN2YGR124W 1719 nt6.47□□□□□ -1.37
TDA11P38854 FRE5YOR384W 2085 nt6.46□□□□□ -1.37
TDA11P38854 THI2YBR240C 1353 nt6.46□□□□□ -1.37
TDA11P38854 AFG1YEL052W 1530 nt6.46□□□□□ -1.37
TDA11P38854 BRN1YBL097W 2265 nt6.46□□□□□ -1.37
TDA11P38854 HEM2YGL040C 1029 nt6.46□□□□□ -1.38
TDA11P38854 RPP1YHR062C 882 nt6.46□□□□□ -1.38
TDA11P38854 SPE3YPR069C 882 nt6.46□□□□□ -1.38
TDA11P38854 YOS9YDR057W 1629 nt6.46□□□□□ -1.38
TDA11P38854 YMR034CYMR034C 1305 nt6.46□□□□□ -1.38
TDA11P38854 STT3YGL022W 2157 nt6.45□□□□□ -1.38
TDA11P38854 PLB3YOL011W 2061 nt6.45□□□□□ -1.38
TDA11P38854 THI4YGR144W 981 nt6.45□□□□□ -1.38
TDA11P38854 REC107YJR021C 945 nt6.45□□□□□ -1.38
TDA11P38854 DFR1YOR236W 636 nt6.45□□□□□ -1.38
TDA11P38854 ERG10YPL028W 1197 nt6.45□□□□□ -1.38
TDA11P38854 snR30snR30 606 nt6.45□□□□□ -1.38
TDA11P38854 HXK2YGL253W 1461 nt6.45□□□□□ -1.38
TDA11P38854 YML133CYML133C 4125 nt6.45□□□□□ -1.38
TDA11P38854 HAS1YMR290C 1518 nt6.45□□□□□ -1.38
TDA11P38854 PDA1YER178W 1263 nt6.44□□□□□ -1.38
TDA11P38854 SQT1YIR012W 1296 nt6.44□□□□□ -1.38
TDA11P38854 SRY1YKL218C 981 nt6.44□□□□□ -1.38
TDA11P38854 ICT1YLR099C 1185 nt6.44□□□□□ -1.38
TDA11P38854 YLR123CYLR123C 330 nt6.44□□□□□ -1.38
TDA11P38854 VPS61YDR136C 573 nt6.43□□□□□ -1.38
TDA11P38854 YPQ2YDR352W 954 nt6.43□□□□□ -1.38
TDA11P38854 MIA40YKL195W 1212 nt6.43□□□□□ -1.38
TDA11P38854 PAM17YKR065C 594 nt6.43□□□□□ -1.38
TDA11P38854 YLR312CYLR312C 1197 nt6.43□□□□□ -1.38
TDA11P38854 YNL092WYNL092W 1203 nt6.43□□□□□ -1.38
TDA11P38854 PYK2YOR347C 1521 nt6.43□□□□□ -1.38
TDA11P38854 DML1YMR211W 1428 nt6.42□□□□□ -1.38
TDA11P38854 BIO3YNR058W 1443 nt6.42□□□□□ -1.38
TDA11P38854 EDE1YBL047C 4146 nt6.42□□□□□ -1.38
TDA11P38854 YHR020WYHR020W 2067 nt6.42□□□□□ -1.38
TDA11P38854 DMA1YHR115C 1251 nt6.42□□□□□ -1.38
TDA11P38854 MTC5YDR128W 3447 nt6.41□□□□□ -1.38
TDA11P38854 MSY1YPL097W 1479 nt6.41□□□□□ -1.38
TDA11P38854 MRPL1YDR116C 858 nt6.4□□□□□ -1.38
TDA11P38854 PMP3YDR276C 168 nt6.4□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms