Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav13-1A0A075B644 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13-1A0A075B644 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13-1A0A075B644 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav13-1A0A075B644 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13-1A0A075B644 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13-1A0A075B644 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13-1A0A075B644 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav13-1A0A075B644 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13-1A0A075B644 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav13-1A0A075B644 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13-1A0A075B644 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13-1A0A075B644 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav13-1A0A075B644 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13-1A0A075B644 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13-1A0A075B644 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Trav13-1A0A075B644 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13-1A0A075B644 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13-1A0A075B644 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
Trav13-1A0A075B644 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13-1A0A075B644 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13-1A0A075B644 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13-1A0A075B644 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13-1A0A075B644 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav13-1A0A075B644 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav13-1A0A075B644 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav13-1A0A075B644 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13-1A0A075B644 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13-1A0A075B644 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13-1A0A075B644 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13-1A0A075B644 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13-1A0A075B644 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav13-1A0A075B644 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13-1A0A075B644 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13-1A0A075B644 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav13-1A0A075B644 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.7■□□□□ 0.1
Trav13-1A0A075B644 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13-1A0A075B644 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13-1A0A075B644 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav13-1A0A075B644 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13-1A0A075B644 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trav13-1A0A075B644 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.69■□□□□ 0.1
Trav13-1A0A075B644 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13-1A0A075B644 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13-1A0A075B644 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13-1A0A075B644 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13-1A0A075B644 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.68■□□□□ 0.1
Trav13-1A0A075B644 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13-1A0A075B644 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav13-1A0A075B644 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13-1A0A075B644 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13-1A0A075B644 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13-1A0A075B644 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13-1A0A075B644 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13-1A0A075B644 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav13-1A0A075B644 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13-1A0A075B644 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13-1A0A075B644 Gm44428-201ENSMUST00000204474 874 ntBASIC15.67■□□□□ 0.1
Trav13-1A0A075B644 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav13-1A0A075B644 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13-1A0A075B644 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav13-1A0A075B644 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav13-1A0A075B644 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13-1A0A075B644 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav13-1A0A075B644 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13-1A0A075B644 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13-1A0A075B644 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trav13-1A0A075B644 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Trav13-1A0A075B644 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav13-1A0A075B644 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav13-1A0A075B644 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav13-1A0A075B644 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13-1A0A075B644 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Trav13-1A0A075B644 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav13-1A0A075B644 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.64■□□□□ 0.09
Trav13-1A0A075B644 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13-1A0A075B644 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13-1A0A075B644 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13-1A0A075B644 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.63■□□□□ 0.09
Trav13-1A0A075B644 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav13-1A0A075B644 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13-1A0A075B644 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13-1A0A075B644 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav13-1A0A075B644 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13-1A0A075B644 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13-1A0A075B644 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav13-1A0A075B644 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13-1A0A075B644 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13-1A0A075B644 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav13-1A0A075B644 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13-1A0A075B644 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13-1A0A075B644 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13-1A0A075B644 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.62■□□□□ 0.09
Trav13-1A0A075B644 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13-1A0A075B644 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13-1A0A075B644 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav13-1A0A075B644 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13-1A0A075B644 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav13-1A0A075B644 Gm10420-201ENSMUST00000121713 882 ntBASIC15.61■□□□□ 0.09
Trav13-1A0A075B644 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms