Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 TSSC2-201ENST00000450217 709 ntBASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 AL592071.1-201ENST00000611956 408 ntBASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 AC012317.2-201ENST00000623305 2251 ntBASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 KRT8P47-201ENST00000604727 1398 ntBASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB13Q9Y5F0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 PCDHB18P-201ENST00000524813 2368 ntBASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 SEC63P1-201ENST00000425785 1258 ntBASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 AC060766.1-201ENST00000590824 627 ntBASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB13Q9Y5F0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 AC011840.4-201ENST00000578471 627 ntBASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 AL353801.3-201ENST00000609898 542 ntBASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 AC006116.8-202ENST00000587620 1550 ntBASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB13Q9Y5F0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms