Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP3Q9Y446 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 AL592071.1-201ENST00000611956 408 ntBASIC17.92■□□□□ 0.46
PKP3Q9Y446 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PKP3Q9Y446 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PKP3Q9Y446 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP3Q9Y446 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PKP3Q9Y446 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP3Q9Y446 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP3Q9Y446 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP3Q9Y446 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PKP3Q9Y446 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.91■□□□□ 0.46
PKP3Q9Y446 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.91■□□□□ 0.46
PKP3Q9Y446 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
PKP3Q9Y446 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.91■□□□□ 0.46
PKP3Q9Y446 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.91■□□□□ 0.46
PKP3Q9Y446 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.91■□□□□ 0.46
PKP3Q9Y446 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.91■□□□□ 0.46
PKP3Q9Y446 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PKP3Q9Y446 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.91■□□□□ 0.46
PKP3Q9Y446 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PKP3Q9Y446 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PKP3Q9Y446 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.91■□□□□ 0.46
PKP3Q9Y446 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.91■□□□□ 0.46
PKP3Q9Y446 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.91■□□□□ 0.46
PKP3Q9Y446 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 AC016734.2-201ENST00000624325 1377 ntBASIC17.91■□□□□ 0.46
PKP3Q9Y446 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP3Q9Y446 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP3Q9Y446 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP3Q9Y446 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.9■□□□□ 0.46
PKP3Q9Y446 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
PKP3Q9Y446 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.9■□□□□ 0.46
PKP3Q9Y446 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP3Q9Y446 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP3Q9Y446 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP3Q9Y446 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP3Q9Y446 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP3Q9Y446 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP3Q9Y446 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP3Q9Y446 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP3Q9Y446 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PKP3Q9Y446 TSSC2-201ENST00000450217 709 ntBASIC17.9■□□□□ 0.46
PKP3Q9Y446 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.9■□□□□ 0.46
PKP3Q9Y446 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.9■□□□□ 0.46
PKP3Q9Y446 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.9■□□□□ 0.46
PKP3Q9Y446 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PKP3Q9Y446 AC069148.1-201ENST00000608741 768 ntBASIC17.9■□□□□ 0.46
PKP3Q9Y446 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.9■□□□□ 0.46
PKP3Q9Y446 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.9■□□□□ 0.46
PKP3Q9Y446 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP3Q9Y446 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP3Q9Y446 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PKP3Q9Y446 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.9■□□□□ 0.46
PKP3Q9Y446 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP3Q9Y446 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
PKP3Q9Y446 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
PKP3Q9Y446 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP3Q9Y446 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PKP3Q9Y446 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
PKP3Q9Y446 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
PKP3Q9Y446 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKP3Q9Y446 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PKP3Q9Y446 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKP3Q9Y446 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKP3Q9Y446 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.89■□□□□ 0.45
PKP3Q9Y446 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PKP3Q9Y446 AL133373.2-201ENST00000623187 2828 ntBASIC17.89■□□□□ 0.45
PKP3Q9Y446 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKP3Q9Y446 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PKP3Q9Y446 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PKP3Q9Y446 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PKP3Q9Y446 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.89■□□□□ 0.45
PKP3Q9Y446 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKP3Q9Y446 RN7SL606P-201ENST00000472779 293 ntBASIC17.89■□□□□ 0.45
PKP3Q9Y446 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
PKP3Q9Y446 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms