Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
UBE2D4Q9Y2X8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 ID1-201ENST00000376105 1233 ntBASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 TSPY17P-201ENST00000450329 467 ntBASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 AL353719.1-201ENST00000566847 864 ntBASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 AC010240.3-201ENST00000607688 395 ntBASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBE2D4Q9Y2X8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 SLC25A1P2-201ENST00000430693 912 ntBASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 AP005242.2-201ENST00000580065 1175 ntBASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 AL023803.3-201ENST00000615559 522 ntBASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 AL359736.2-201ENST00000621992 437 ntBASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBE2D4Q9Y2X8 AL139384.1-201ENST00000612143 3047 ntBASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D4Q9Y2X8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms