Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HDAC6Q9UBN7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HDAC6Q9UBN7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 MTCL1P1-201ENST00000446207 792 ntBASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 AF186996.4-201ENST00000467186 377 ntBASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 AC006538.3-201ENST00000612495 578 ntBASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 LINC00602-201ENST00000629776 2065 ntBASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HDAC6Q9UBN7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 SLC25A1P1-201ENST00000528351 927 ntBASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 AC009154.2-201ENST00000621177 724 ntBASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 LINC01126-201ENST00000623515 1646 ntBASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.11■□□□□ 0.81
HDAC6Q9UBN7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms