Protein–RNA interactions for Protein: Q9NZZ3

CHMP5, Charged multivesicular body protein 5, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5Q9NZZ3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.03■□□□□ 0.96
CHMP5Q9NZZ3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP5Q9NZZ3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP5Q9NZZ3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CHMP5Q9NZZ3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP5Q9NZZ3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC21.03■□□□□ 0.96
CHMP5Q9NZZ3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP5Q9NZZ3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP5Q9NZZ3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.03■□□□□ 0.96
CHMP5Q9NZZ3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CHMP5Q9NZZ3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CHMP5Q9NZZ3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 AL353807.1-201ENST00000427475 662 ntBASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 AC142086.2-201ENST00000569753 217 ntBASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP5Q9NZZ3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHMP5Q9NZZ3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
CHMP5Q9NZZ3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CHMP5Q9NZZ3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 AL603756.1-201ENST00000606511 2163 ntBASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 AC009949.1-201ENST00000623048 1830 ntBASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP5Q9NZZ3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 AC016396.2-201ENST00000562575 1417 ntBASIC21■□□□□ 0.95
CHMP5Q9NZZ3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 FSCN1P1-201ENST00000568912 1481 ntBASIC21■□□□□ 0.95
CHMP5Q9NZZ3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP5Q9NZZ3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CHMP5Q9NZZ3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.99■□□□□ 0.95
CHMP5Q9NZZ3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.99■□□□□ 0.95
CHMP5Q9NZZ3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CHMP5Q9NZZ3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.99■□□□□ 0.95
CHMP5Q9NZZ3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.99■□□□□ 0.95
CHMP5Q9NZZ3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.99■□□□□ 0.95
CHMP5Q9NZZ3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms