Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 FLJ13224-201ENST00000313737 1514 ntBASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 RN7SL606P-201ENST00000472779 293 ntBASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 AC068472.1-201ENST00000474589 881 ntBASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 REXO1L9P-201ENST00000604264 2108 ntBASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PARPBPQ9NWS1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PARPBPQ9NWS1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
PARPBPQ9NWS1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.96■□□□□ 0.14
PARPBPQ9NWS1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PARPBPQ9NWS1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
PARPBPQ9NWS1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 ATP5G2P1-201ENST00000433580 426 ntBASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 MTCL1P1-201ENST00000446207 792 ntBASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 AL592071.1-201ENST00000611956 408 ntBASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 AC116407.2-201ENST00000613639 860 ntBASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 AC093458.2-201ENST00000623150 629 ntBASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.95■□□□□ 0.14
PARPBPQ9NWS1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 OR6D1P-203ENST00000641209 4860 ntBASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 AC246785.2-201ENST00000432512 513 ntBASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 DRAXINP1-201ENST00000437611 948 ntBASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PARPBPQ9NWS1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms