Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 AP003071.4-201ENST00000562276 1284 ntBASIC18.57■□□□□ 0.56
DDX47Q9H0S4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 AL390955.1-201ENST00000428694 934 ntBASIC18.56■□□□□ 0.56
DDX47Q9H0S4 CCR12P-201ENST00000446203 998 ntBASIC18.56■□□□□ 0.56
DDX47Q9H0S4 RBM17P1-201ENST00000453646 1190 ntBASIC18.56■□□□□ 0.56
DDX47Q9H0S4 AC098590.1-201ENST00000468126 897 ntBASIC18.56■□□□□ 0.56
DDX47Q9H0S4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX47Q9H0S4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
DDX47Q9H0S4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX47Q9H0S4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX47Q9H0S4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX47Q9H0S4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX47Q9H0S4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX47Q9H0S4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX47Q9H0S4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX47Q9H0S4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX47Q9H0S4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX47Q9H0S4 UNC93B2-201ENST00000285383 730 ntBASIC18.54■□□□□ 0.56
DDX47Q9H0S4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX47Q9H0S4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX47Q9H0S4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX47Q9H0S4 AL158047.1-201ENST00000445918 881 ntBASIC18.54■□□□□ 0.56
DDX47Q9H0S4 UBE2SP1-201ENST00000450587 669 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms