Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMOQ99835 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMOQ99835 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMOQ99835 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SMOQ99835 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMOQ99835 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMOQ99835 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.66■□□□□ 0.58
SMOQ99835 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.66■□□□□ 0.58
SMOQ99835 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.66■□□□□ 0.58
SMOQ99835 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SMOQ99835 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
SMOQ99835 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.66■□□□□ 0.58
SMOQ99835 AP000867.4-201ENST00000641616 219 ntBASIC18.66■□□□□ 0.58
SMOQ99835 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SMOQ99835 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.66■□□□□ 0.58
SMOQ99835 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMOQ99835 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SMOQ99835 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMOQ99835 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SMOQ99835 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.65■□□□□ 0.58
SMOQ99835 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMOQ99835 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMOQ99835 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMOQ99835 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SMOQ99835 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMOQ99835 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
SMOQ99835 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMOQ99835 BX276092.7-203ENST00000637198 1536 ntBASIC18.65■□□□□ 0.58
SMOQ99835 AC007613.1-201ENST00000572811 2597 ntBASIC18.65■□□□□ 0.58
SMOQ99835 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMOQ99835 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMOQ99835 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SMOQ99835 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMOQ99835 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.65■□□□□ 0.58
SMOQ99835 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.65■□□□□ 0.58
SMOQ99835 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.65■□□□□ 0.58
SMOQ99835 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SMOQ99835 AC008608.2-201ENST00000606089 416 ntBASIC18.65■□□□□ 0.58
SMOQ99835 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SMOQ99835 AL355877.3-201ENST00000622820 899 ntBASIC18.65■□□□□ 0.58
SMOQ99835 AD001527.2-201ENST00000622994 785 ntBASIC18.65■□□□□ 0.58
SMOQ99835 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.65■□□□□ 0.58
SMOQ99835 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.65■□□□□ 0.58
SMOQ99835 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMOQ99835 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMOQ99835 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMOQ99835 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.65■□□□□ 0.58
SMOQ99835 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMOQ99835 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMOQ99835 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMOQ99835 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMOQ99835 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMOQ99835 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.65■□□□□ 0.58
SMOQ99835 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.65■□□□□ 0.58
SMOQ99835 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMOQ99835 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMOQ99835 AL049757.1-201ENST00000616842 1596 ntBASIC18.64■□□□□ 0.58
SMOQ99835 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.64■□□□□ 0.57
SMOQ99835 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.64■□□□□ 0.57
SMOQ99835 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMOQ99835 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMOQ99835 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMOQ99835 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.64■□□□□ 0.57
SMOQ99835 RBM17P3-201ENST00000417687 1192 ntBASIC18.64■□□□□ 0.57
SMOQ99835 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.64■□□□□ 0.57
SMOQ99835 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.64■□□□□ 0.57
SMOQ99835 FGFR3P6-201ENST00000457012 610 ntBASIC18.64■□□□□ 0.57
SMOQ99835 MTDHP3-201ENST00000594186 672 ntBASIC18.64■□□□□ 0.57
SMOQ99835 AC019129.2-201ENST00000609837 1235 ntBASIC18.64■□□□□ 0.57
SMOQ99835 TP73-AS1-207ENST00000624167 988 ntBASIC18.64■□□□□ 0.57
SMOQ99835 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMOQ99835 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMOQ99835 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMOQ99835 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMOQ99835 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMOQ99835 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SMOQ99835 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMOQ99835 AC006116.8-202ENST00000587620 1550 ntBASIC18.64■□□□□ 0.57
SMOQ99835 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.63■□□□□ 0.57
SMOQ99835 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.63■□□□□ 0.57
SMOQ99835 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMOQ99835 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SMOQ99835 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.63■□□□□ 0.57
SMOQ99835 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMOQ99835 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMOQ99835 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMOQ99835 AC008764.6-201ENST00000595909 2069 ntBASIC18.63■□□□□ 0.57
SMOQ99835 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SMOQ99835 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.63■□□□□ 0.57
SMOQ99835 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMOQ99835 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMOQ99835 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMOQ99835 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SMOQ99835 AC026396.1-201ENST00000419388 421 ntBASIC18.63■□□□□ 0.57
SMOQ99835 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.63■□□□□ 0.57
SMOQ99835 AC103564.2-201ENST00000432853 1299 ntBASIC18.63■□□□□ 0.57
SMOQ99835 SLC25A6P5-201ENST00000435663 894 ntBASIC18.63■□□□□ 0.57
SMOQ99835 AL160237.2-201ENST00000556165 472 ntBASIC18.63■□□□□ 0.57
SMOQ99835 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.63■□□□□ 0.57
SMOQ99835 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms