Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NDNQ99608 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDNQ99608 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.9■□□□□ 0.46
NDNQ99608 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDNQ99608 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NDNQ99608 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
NDNQ99608 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
NDNQ99608 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.89■□□□□ 0.45
NDNQ99608 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.89■□□□□ 0.45
NDNQ99608 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.89■□□□□ 0.45
NDNQ99608 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDNQ99608 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDNQ99608 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDNQ99608 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDNQ99608 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDNQ99608 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDNQ99608 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.89■□□□□ 0.45
NDNQ99608 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.89■□□□□ 0.45
NDNQ99608 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.89■□□□□ 0.45
NDNQ99608 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
NDNQ99608 AC011558.1-201ENST00000623459 338 ntBASIC17.89■□□□□ 0.45
NDNQ99608 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.89■□□□□ 0.45
NDNQ99608 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NDNQ99608 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDNQ99608 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NDNQ99608 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
NDNQ99608 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDNQ99608 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDNQ99608 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDNQ99608 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NDNQ99608 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDNQ99608 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.89■□□□□ 0.45
NDNQ99608 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.88■□□□□ 0.45
NDNQ99608 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NDNQ99608 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.88■□□□□ 0.45
NDNQ99608 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.88■□□□□ 0.45
NDNQ99608 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.88■□□□□ 0.45
NDNQ99608 KRT18P57-201ENST00000443599 1254 ntBASIC17.88■□□□□ 0.45
NDNQ99608 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.88■□□□□ 0.45
NDNQ99608 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.88■□□□□ 0.45
NDNQ99608 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.88■□□□□ 0.45
NDNQ99608 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NDNQ99608 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NDNQ99608 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.88■□□□□ 0.45
NDNQ99608 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NDNQ99608 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.87■□□□□ 0.45
NDNQ99608 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.87■□□□□ 0.45
NDNQ99608 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 AL391807.1-203ENST00000604392 2365 ntBASIC17.87■□□□□ 0.45
NDNQ99608 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NDNQ99608 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.87■□□□□ 0.45
NDNQ99608 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 AC005521.1-201ENST00000393351 872 ntBASIC17.87■□□□□ 0.45
NDNQ99608 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.87■□□□□ 0.45
NDNQ99608 YBX1P2-201ENST00000489612 999 ntBASIC17.87■□□□□ 0.45
NDNQ99608 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.87■□□□□ 0.45
NDNQ99608 AC008687.5-201ENST00000593746 558 ntBASIC17.87■□□□□ 0.45
NDNQ99608 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
NDNQ99608 AL136038.4-201ENST00000603606 1261 ntBASIC17.87■□□□□ 0.45
NDNQ99608 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.87■□□□□ 0.45
NDNQ99608 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
NDNQ99608 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NDNQ99608 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 PP12613-201ENST00000424958 2230 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms