Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 TERF1P1-201ENST00000311003 1181 ntBASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 AC211429.1-201ENST00000415277 523 ntBASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 DUTP2-201ENST00000519164 463 ntBASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 AC139887.4-201ENST00000607877 719 ntBASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 AC011558.1-201ENST00000623459 338 ntBASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 KRT18P55-202ENST00000578578 1546 ntBASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H2AAQ96QV6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 AC134043.2-201ENST00000624206 2238 ntBASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 AC005521.1-201ENST00000393351 872 ntBASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 KRT18P48-201ENST00000434763 852 ntBASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 YBX1P2-201ENST00000489612 999 ntBASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 AL441883.1-201ENST00000566170 1045 ntBASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 AL136038.4-201ENST00000603606 1261 ntBASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 AC012306.2-201ENST00000609350 630 ntBASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 AC116407.2-201ENST00000613639 860 ntBASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIST1H2AAQ96QV6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HIST1H2AAQ96QV6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.46■□□□□ 0.06
HIST1H2AAQ96QV6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
HIST1H2AAQ96QV6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.46■□□□□ 0.06
HIST1H2AAQ96QV6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
HIST1H2AAQ96QV6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
HIST1H2AAQ96QV6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HIST1H2AAQ96QV6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms