Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 NUS1P1-201ENST00000446295 882 ntBASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD1Q96NR3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD1Q96NR3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 FOSL1P1-201ENST00000511041 816 ntBASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 AC005336.2-201ENST00000593183 939 ntBASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 AC138894.3-201ENST00000603787 634 ntBASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 PKD1P1-201ENST00000458669 6805 ntBASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.79■□□□□ 0.28
PTCHD1Q96NR3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms