Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 INGX-201ENST00000359239 846 ntBASIC18.87■□□□□ 0.61
CALR3Q96L12 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.87■□□□□ 0.61
CALR3Q96L12 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALR3Q96L12 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALR3Q96L12 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.87■□□□□ 0.61
CALR3Q96L12 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.87■□□□□ 0.61
CALR3Q96L12 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.87■□□□□ 0.61
CALR3Q96L12 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.87■□□□□ 0.61
CALR3Q96L12 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.87■□□□□ 0.61
CALR3Q96L12 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CALR3Q96L12 AC024563.2-201ENST00000603282 481 ntBASIC18.87■□□□□ 0.61
CALR3Q96L12 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CALR3Q96L12 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALR3Q96L12 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALR3Q96L12 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALR3Q96L12 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CALR3Q96L12 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.86■□□□□ 0.61
CALR3Q96L12 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.86■□□□□ 0.61
CALR3Q96L12 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.86■□□□□ 0.61
CALR3Q96L12 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CALR3Q96L12 AC016396.2-201ENST00000562575 1417 ntBASIC18.86■□□□□ 0.61
CALR3Q96L12 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 MMP23A-201ENST00000234610 1017 ntBASIC18.86■□□□□ 0.61
CALR3Q96L12 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.86■□□□□ 0.61
CALR3Q96L12 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 ECEL1P3-201ENST00000427961 737 ntBASIC18.86■□□□□ 0.61
CALR3Q96L12 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.86■□□□□ 0.61
CALR3Q96L12 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.86■□□□□ 0.61
CALR3Q96L12 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.86■□□□□ 0.61
CALR3Q96L12 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.86■□□□□ 0.61
CALR3Q96L12 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.86■□□□□ 0.61
CALR3Q96L12 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.86■□□□□ 0.61
CALR3Q96L12 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CALR3Q96L12 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALR3Q96L12 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CALR3Q96L12 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CALR3Q96L12 CYP2D8P-201ENST00000433633 1490 ntBASIC18.85■□□□□ 0.61
CALR3Q96L12 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.85■□□□□ 0.61
CALR3Q96L12 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALR3Q96L12 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALR3Q96L12 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.85■□□□□ 0.61
CALR3Q96L12 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CALR3Q96L12 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALR3Q96L12 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.85■□□□□ 0.61
CALR3Q96L12 SNORA78-201ENST00000459373 127 ntBASIC18.85■□□□□ 0.61
CALR3Q96L12 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.85■□□□□ 0.61
CALR3Q96L12 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.85■□□□□ 0.61
CALR3Q96L12 AL157888.1-201ENST00000631930 593 ntBASIC18.85■□□□□ 0.61
CALR3Q96L12 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CALR3Q96L12 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CALR3Q96L12 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CALR3Q96L12 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.85■□□□□ 0.61
CALR3Q96L12 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CALR3Q96L12 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALR3Q96L12 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.85■□□□□ 0.61
CALR3Q96L12 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CALR3Q96L12 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.85■□□□□ 0.61
CALR3Q96L12 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALR3Q96L12 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.85■□□□□ 0.61
CALR3Q96L12 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALR3Q96L12 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CALR3Q96L12 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CALR3Q96L12 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CALR3Q96L12 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CALR3Q96L12 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.84■□□□□ 0.61
CALR3Q96L12 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
CALR3Q96L12 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CALR3Q96L12 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.84■□□□□ 0.61
CALR3Q96L12 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.84■□□□□ 0.61
CALR3Q96L12 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.84■□□□□ 0.61
CALR3Q96L12 MIR4497-201ENST00000583208 89 ntBASIC18.84■□□□□ 0.61
CALR3Q96L12 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.84■□□□□ 0.61
CALR3Q96L12 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms