Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE4Q96A23 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CPNE4Q96A23 NSUN5P1-202ENST00000421140 1535 ntBASIC16■□□□□ 0.15
CPNE4Q96A23 NSUN5P2-203ENST00000457352 1529 ntBASIC16■□□□□ 0.15
CPNE4Q96A23 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE4Q96A23 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16■□□□□ 0.15
CPNE4Q96A23 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16■□□□□ 0.15
CPNE4Q96A23 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE4Q96A23 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE4Q96A23 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE4Q96A23 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE4Q96A23 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE4Q96A23 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE4Q96A23 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16■□□□□ 0.15
CPNE4Q96A23 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
CPNE4Q96A23 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16■□□□□ 0.15
CPNE4Q96A23 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE4Q96A23 IGHV3-47-201ENST00000425060 335 ntBASIC16■□□□□ 0.15
CPNE4Q96A23 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CPNE4Q96A23 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16■□□□□ 0.15
CPNE4Q96A23 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16■□□□□ 0.15
CPNE4Q96A23 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE4Q96A23 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE4Q96A23 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16■□□□□ 0.15
CPNE4Q96A23 AC009533.2-201ENST00000543664 586 ntBASIC16■□□□□ 0.15
CPNE4Q96A23 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CPNE4Q96A23 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16■□□□□ 0.15
CPNE4Q96A23 AP005901.3-202ENST00000581653 237 ntBASIC16■□□□□ 0.15
CPNE4Q96A23 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE4Q96A23 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16■□□□□ 0.15
CPNE4Q96A23 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16■□□□□ 0.15
CPNE4Q96A23 AC005332.8-201ENST00000622750 2735 ntBASIC16■□□□□ 0.15
CPNE4Q96A23 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CPNE4Q96A23 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CPNE4Q96A23 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE4Q96A23 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE4Q96A23 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16■□□□□ 0.15
CPNE4Q96A23 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CPNE4Q96A23 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CPNE4Q96A23 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
CPNE4Q96A23 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.99■□□□□ 0.15
CPNE4Q96A23 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.99■□□□□ 0.15
CPNE4Q96A23 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.99■□□□□ 0.15
CPNE4Q96A23 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.99■□□□□ 0.15
CPNE4Q96A23 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.99■□□□□ 0.15
CPNE4Q96A23 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.99■□□□□ 0.15
CPNE4Q96A23 AC005336.2-201ENST00000593183 939 ntBASIC15.99■□□□□ 0.15
CPNE4Q96A23 CLEC4GP1-201ENST00000596555 870 ntBASIC15.99■□□□□ 0.15
CPNE4Q96A23 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.99■□□□□ 0.15
CPNE4Q96A23 AC099336.1-202ENST00000602961 463 ntBASIC15.99■□□□□ 0.15
CPNE4Q96A23 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.99■□□□□ 0.15
CPNE4Q96A23 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CPNE4Q96A23 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.99■□□□□ 0.15
CPNE4Q96A23 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.99■□□□□ 0.15
CPNE4Q96A23 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE4Q96A23 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.99■□□□□ 0.15
CPNE4Q96A23 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 AP000997.3-201ENST00000623333 2250 ntBASIC15.98■□□□□ 0.15
CPNE4Q96A23 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 AC106820.2-201ENST00000563775 3264 ntBASIC15.98■□□□□ 0.15
CPNE4Q96A23 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 POM121L3P-201ENST00000419331 1163 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms