Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2E3Q969T4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2E3Q969T4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 KRT8P47-201ENST00000604727 1398 ntBASIC17.15■□□□□ 0.34
UBE2E3Q969T4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2E3Q969T4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
UBE2E3Q969T4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 TSPY22P-201ENST00000427496 604 ntBASIC17.14■□□□□ 0.33
UBE2E3Q969T4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 AC090616.6-201ENST00000582640 721 ntBASIC17.14■□□□□ 0.33
UBE2E3Q969T4 AC011498.5-201ENST00000592027 486 ntBASIC17.14■□□□□ 0.33
UBE2E3Q969T4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBE2E3Q969T4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 AC009949.1-201ENST00000623048 1830 ntBASIC17.13■□□□□ 0.33
UBE2E3Q969T4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 AL031133.1-201ENST00000406807 723 ntBASIC17.13■□□□□ 0.33
UBE2E3Q969T4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 LINC01451-201ENST00000623792 534 ntBASIC17.13■□□□□ 0.33
UBE2E3Q969T4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2E3Q969T4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 BX276092.7-203ENST00000637198 1536 ntBASIC17.12■□□□□ 0.33
UBE2E3Q969T4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2E3Q969T4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms