Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 AC005332.1-201ENST00000577698 1310 ntBASIC19.66■□□□□ 0.74
ATRIPQ8WXE1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.66■□□□□ 0.74
ATRIPQ8WXE1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATRIPQ8WXE1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ATRIPQ8WXE1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
ATRIPQ8WXE1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.66■□□□□ 0.74
ATRIPQ8WXE1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ATRIPQ8WXE1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATRIPQ8WXE1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.66■□□□□ 0.74
ATRIPQ8WXE1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ATRIPQ8WXE1 GMCL1P1-201ENST00000463439 1581 ntBASIC19.66■□□□□ 0.74
ATRIPQ8WXE1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 AC096733.2-201ENST00000609937 1394 ntBASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 GPAT2P1-201ENST00000444924 1672 ntBASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATRIPQ8WXE1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ATRIPQ8WXE1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATRIPQ8WXE1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.64■□□□□ 0.74
ATRIPQ8WXE1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.64■□□□□ 0.74
ATRIPQ8WXE1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATRIPQ8WXE1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 TSPY17P-201ENST00000450329 467 ntBASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 SDHAP2-201ENST00000455183 2001 ntBASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATRIPQ8WXE1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 MIR564-202ENST00000385049 94 ntBASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 AL023284.2-201ENST00000405850 579 ntBASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATRIPQ8WXE1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms