Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 UNC93B2-201ENST00000285383 730 ntBASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 KRT18P65-201ENST00000439811 1286 ntBASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 AC073912.3-201ENST00000624414 853 ntBASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPS4Y2Q8TD47 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RPS4Y2Q8TD47 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RPS4Y2Q8TD47 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.58■□□□□ 0.09
RPS4Y2Q8TD47 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.58■□□□□ 0.09
RPS4Y2Q8TD47 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.58■□□□□ 0.09
RPS4Y2Q8TD47 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RPS4Y2Q8TD47 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 AC116353.5-201ENST00000638148 1699 ntBASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 TSPY14P-201ENST00000303979 915 ntBASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 AL355075.4-201ENST00000554988 638 ntBASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.58■□□□□ 0.08
RPS4Y2Q8TD47 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RPS4Y2Q8TD47 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms