Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 AL353692.3-201ENST00000407031 1396 ntBASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 AC139713.2-201ENST00000641328 2723 ntBASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 LINC00304-203ENST00000565008 1864 ntBASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 KRT18P1-202ENST00000452408 1331 ntBASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 AP002414.4-201ENST00000589764 1148 ntBASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 AC092329.2-201ENST00000598402 547 ntBASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 AC133963.1-201ENST00000504166 1679 ntBASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.86■□□□□ 0.93
SMARCC2Q8TAQ2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 AC009949.1-201ENST00000623048 1830 ntBASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 AC020916.1-201ENST00000587762 1774 ntBASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 AP002383.4-201ENST00000442518 975 ntBASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 IGHV3-41-201ENST00000613121 348 ntBASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.85■□□□□ 0.93
SMARCC2Q8TAQ2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 AC090616.6-201ENST00000582640 721 ntBASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 AC009154.2-201ENST00000621177 724 ntBASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 REXO1L11P-201ENST00000620964 1927 ntBASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCC2Q8TAQ2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 BCL2-203ENST00000589955 5011 ntBASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 SIRPAP1-201ENST00000448467 1770 ntBASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms