Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 AC066615.1-201ENST00000640911 628 ntBASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLHC1Q8NHS4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 AC145285.6-201ENST00000604632 637 ntBASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 AL138966.2-201ENST00000621997 464 ntBASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 AC022898.2-201ENST00000616822 1312 ntBASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 AC009949.1-201ENST00000623048 1830 ntBASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.12■□□□□ 0.33
CLHC1Q8NHS4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 SLC25A3P1-201ENST00000443844 931 ntBASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 AC010203.1-204ENST00000548782 407 ntBASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 AC008687.5-201ENST00000593746 558 ntBASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CLHC1Q8NHS4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLHC1Q8NHS4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLHC1Q8NHS4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLHC1Q8NHS4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.1■□□□□ 0.33
CLHC1Q8NHS4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.1■□□□□ 0.33
CLHC1Q8NHS4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLHC1Q8NHS4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLHC1Q8NHS4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLHC1Q8NHS4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.1■□□□□ 0.33
CLHC1Q8NHS4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.1■□□□□ 0.33
CLHC1Q8NHS4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLHC1Q8NHS4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.1■□□□□ 0.33
CLHC1Q8NHS4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms