Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.38■□□□□ 0.53
NPAS3Q8IXF0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.38■□□□□ 0.53
NPAS3Q8IXF0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS3Q8IXF0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NPAS3Q8IXF0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS3Q8IXF0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS3Q8IXF0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.38■□□□□ 0.53
NPAS3Q8IXF0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NPAS3Q8IXF0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
NPAS3Q8IXF0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
NPAS3Q8IXF0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.38■□□□□ 0.53
NPAS3Q8IXF0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 SIRPAP1-201ENST00000448467 1770 ntBASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 AL020989.1-201ENST00000422979 469 ntBASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 HMGN1P19-201ENST00000436976 333 ntBASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 AC004706.3-202ENST00000621574 984 ntBASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 AC022898.2-201ENST00000616822 1312 ntBASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 AL353593.2-201ENST00000602529 1483 ntBASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 AC093503.3-201ENST00000624917 2352 ntBASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NPAS3Q8IXF0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 DNAJB3-202ENST00000449667 1266 ntBASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 AL355385.1-201ENST00000606123 409 ntBASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPAS3Q8IXF0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 AC132938.5-201ENST00000624980 1813 ntBASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 AC027796.2-201ENST00000575326 344 ntBASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.35■□□□□ 0.53
NPAS3Q8IXF0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms