Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SHFQ7M4L6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SHFQ7M4L6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.13■□□□□ 0.17
SHFQ7M4L6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 AC104390.1-201ENST00000555663 520 ntBASIC16.13■□□□□ 0.17
SHFQ7M4L6 C2orf69P3-201ENST00000565542 1120 ntBASIC16.13■□□□□ 0.17
SHFQ7M4L6 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 AC112497.1-201ENST00000624824 639 ntBASIC16.13■□□□□ 0.17
SHFQ7M4L6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHFQ7M4L6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.13■□□□□ 0.17
SHFQ7M4L6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SHFQ7M4L6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
SHFQ7M4L6 AC092338.2-201ENST00000568827 1415 ntBASIC16.12■□□□□ 0.17
SHFQ7M4L6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 AC132938.6-201ENST00000623828 1655 ntBASIC16.12■□□□□ 0.17
SHFQ7M4L6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.12■□□□□ 0.17
SHFQ7M4L6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.12■□□□□ 0.17
SHFQ7M4L6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.12■□□□□ 0.17
SHFQ7M4L6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SHFQ7M4L6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.12■□□□□ 0.17
SHFQ7M4L6 FITM1-202ENST00000559294 800 ntBASIC16.12■□□□□ 0.17
SHFQ7M4L6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.12■□□□□ 0.17
SHFQ7M4L6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.12■□□□□ 0.17
SHFQ7M4L6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SHFQ7M4L6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.12■□□□□ 0.17
SHFQ7M4L6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHFQ7M4L6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 AC133963.1-201ENST00000504166 1679 ntBASIC16.11■□□□□ 0.17
SHFQ7M4L6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.11■□□□□ 0.17
SHFQ7M4L6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms