Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 AP000525.1-201ENST00000608286 694 ntBASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
PTCHD4Q6ZW05 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 AL353719.1-201ENST00000566847 864 ntBASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 CR769767.2-201ENST00000622735 460 ntBASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTCHD4Q6ZW05 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 CROCCP2-202ENST00000412962 2773 ntBASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 AC133963.1-201ENST00000504166 1679 ntBASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 SLC25A1P2-201ENST00000430693 912 ntBASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 HOXB1-202ENST00000577092 1414 ntBASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 LINC01126-201ENST00000623515 1646 ntBASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTCHD4Q6ZW05 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 AC092338.2-201ENST00000568827 1415 ntBASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 KRT18P23-201ENST00000435622 1283 ntBASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 TSPY17P-201ENST00000450329 467 ntBASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.4■□□□□ 0.22
PTCHD4Q6ZW05 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms