Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF111Q6ZNA4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF111Q6ZNA4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 BX664615.1-201ENST00000443558 458 ntBASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 KRT18P21-201ENST00000515767 1272 ntBASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 RN7SL850P-201ENST00000579959 291 ntBASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF111Q6ZNA4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 KRT18P23-201ENST00000435622 1283 ntBASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 COX11P1-201ENST00000489116 835 ntBASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF111Q6ZNA4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 KRT8P7-201ENST00000533003 1432 ntBASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 TMPOP1-202ENST00000424642 1267 ntBASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 AC140113.3-201ENST00000605663 199 ntBASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 AC112497.1-201ENST00000624824 639 ntBASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 AL031432.5-201ENST00000641059 760 ntBASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF111Q6ZNA4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms