Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 AL023806.1-201ENST00000603994 1649 ntBASIC16.24■□□□□ 0.19
NIPAL3Q6P499 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 AC112907.2-201ENST00000448639 330 ntBASIC16.24■□□□□ 0.19
NIPAL3Q6P499 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 AL136038.4-201ENST00000603606 1261 ntBASIC16.24■□□□□ 0.19
NIPAL3Q6P499 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.24■□□□□ 0.19
NIPAL3Q6P499 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 FAM8A6P-201ENST00000407496 1135 ntBASIC16.23■□□□□ 0.19
NIPAL3Q6P499 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 AC079602.3-201ENST00000623931 403 ntBASIC16.23■□□□□ 0.19
NIPAL3Q6P499 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 AL391807.1-203ENST00000604392 2365 ntBASIC16.23■□□□□ 0.19
NIPAL3Q6P499 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NIPAL3Q6P499 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 AL355312.1-201ENST00000407115 2176 ntBASIC16.22■□□□□ 0.19
NIPAL3Q6P499 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 AC092597.1-201ENST00000487352 616 ntBASIC16.22■□□□□ 0.19
NIPAL3Q6P499 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.22■□□□□ 0.19
NIPAL3Q6P499 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NIPAL3Q6P499 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms