Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 AC142381.4-202ENST00000563973 229 ntBASIC17.99■□□□□ 0.47
LGSNQ5TDP6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 CROCCP2-202ENST00000412962 2773 ntBASIC17.99■□□□□ 0.47
LGSNQ5TDP6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
LGSNQ5TDP6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 LINC00304-203ENST00000565008 1864 ntBASIC17.98■□□□□ 0.47
LGSNQ5TDP6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LGSNQ5TDP6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LGSNQ5TDP6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.96■□□□□ 0.47
LGSNQ5TDP6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 AP003071.4-201ENST00000562276 1284 ntBASIC17.96■□□□□ 0.47
LGSNQ5TDP6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 AC010653.2-201ENST00000623505 997 ntBASIC17.96■□□□□ 0.47
LGSNQ5TDP6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.96■□□□□ 0.47
LGSNQ5TDP6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms