Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.51■□□□□ 0.07
ATPAF1Q5TC12 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 COX11P1-201ENST00000489116 835 ntBASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 AC104390.1-201ENST00000555663 520 ntBASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 NKILA-202ENST00000614771 2598 ntBASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 CROCCP1-201ENST00000426910 5675 ntBASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
ATPAF1Q5TC12 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATPAF1Q5TC12 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms