Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.55■□□□□ 0.4
CTSL3PQ5NE16 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSL3PQ5NE16 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTSL3PQ5NE16 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 IER3-202ENST00000376377 1350 ntBASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 AC010460.3-201ENST00000511359 1579 ntBASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 CHCHD2P8-201ENST00000429873 447 ntBASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 BX276092.5-203ENST00000456199 560 ntBASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 AC091607.1-201ENST00000490318 1060 ntBASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 AL445228.2-201ENST00000605589 952 ntBASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTSL3PQ5NE16 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 BX276092.7-203ENST00000637198 1536 ntBASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 AC010331.1-201ENST00000611423 582 ntBASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 LINC01451-201ENST00000623792 534 ntBASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 AC139713.2-201ENST00000641328 2723 ntBASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CTSL3PQ5NE16 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTSL3PQ5NE16 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTSL3PQ5NE16 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms