Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.64■□□□□ 0.09
CHRFAM7AQ494W8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.64■□□□□ 0.09
CHRFAM7AQ494W8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRFAM7AQ494W8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.64■□□□□ 0.09
CHRFAM7AQ494W8 GCSHP2-201ENST00000560971 527 ntBASIC15.64■□□□□ 0.09
CHRFAM7AQ494W8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.64■□□□□ 0.09
CHRFAM7AQ494W8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.64■□□□□ 0.09
CHRFAM7AQ494W8 HYMAI.1-201ENST00000620949 238 ntBASIC15.64■□□□□ 0.09
CHRFAM7AQ494W8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRFAM7AQ494W8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRFAM7AQ494W8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.64■□□□□ 0.09
CHRFAM7AQ494W8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRFAM7AQ494W8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.64■□□□□ 0.09
CHRFAM7AQ494W8 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRFAM7AQ494W8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
CHRFAM7AQ494W8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 AL645929.1-201ENST00000420084 975 ntBASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 AL357033.4-201ENST00000617703 1807 ntBASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRFAM7AQ494W8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 REXO1L9P-201ENST00000604264 2108 ntBASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHRFAM7AQ494W8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHRFAM7AQ494W8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms