Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ERVFC1P60507 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ERVFC1P60507 AC003669.1-201ENST00000334569 611 ntBASIC18.65■□□□□ 0.58
ERVFC1P60507 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERVFC1P60507 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERVFC1P60507 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.65■□□□□ 0.58
ERVFC1P60507 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
ERVFC1P60507 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
ERVFC1P60507 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.65■□□□□ 0.58
ERVFC1P60507 AC109462.3-201ENST00000573934 613 ntBASIC18.65■□□□□ 0.58
ERVFC1P60507 AC004877.2-201ENST00000623941 599 ntBASIC18.65■□□□□ 0.58
ERVFC1P60507 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.65■□□□□ 0.58
ERVFC1P60507 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERVFC1P60507 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERVFC1P60507 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERVFC1P60507 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERVFC1P60507 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERVFC1P60507 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERVFC1P60507 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ERVFC1P60507 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
ERVFC1P60507 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.64■□□□□ 0.58
ERVFC1P60507 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
ERVFC1P60507 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ERVFC1P60507 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ERVFC1P60507 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERVFC1P60507 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERVFC1P60507 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERVFC1P60507 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ERVFC1P60507 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ERVFC1P60507 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERVFC1P60507 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERVFC1P60507 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.64■□□□□ 0.57
ERVFC1P60507 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERVFC1P60507 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.64■□□□□ 0.57
ERVFC1P60507 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.64■□□□□ 0.57
ERVFC1P60507 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.64■□□□□ 0.57
ERVFC1P60507 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.64■□□□□ 0.57
ERVFC1P60507 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.64■□□□□ 0.57
ERVFC1P60507 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.64■□□□□ 0.57
ERVFC1P60507 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.64■□□□□ 0.57
ERVFC1P60507 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.64■□□□□ 0.57
ERVFC1P60507 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.64■□□□□ 0.57
ERVFC1P60507 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.64■□□□□ 0.57
ERVFC1P60507 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.64■□□□□ 0.57
ERVFC1P60507 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
ERVFC1P60507 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERVFC1P60507 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERVFC1P60507 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERVFC1P60507 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.64■□□□□ 0.57
ERVFC1P60507 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ERVFC1P60507 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERVFC1P60507 AC018445.3-201ENST00000624177 1945 ntBASIC18.64■□□□□ 0.57
ERVFC1P60507 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.64■□□□□ 0.57
ERVFC1P60507 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERVFC1P60507 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERVFC1P60507 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.64■□□□□ 0.57
ERVFC1P60507 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
ERVFC1P60507 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.64■□□□□ 0.57
ERVFC1P60507 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERVFC1P60507 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERVFC1P60507 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERVFC1P60507 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERVFC1P60507 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERVFC1P60507 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.63■□□□□ 0.57
ERVFC1P60507 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERVFC1P60507 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERVFC1P60507 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERVFC1P60507 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERVFC1P60507 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERVFC1P60507 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERVFC1P60507 MRPL20P1-201ENST00000400819 433 ntBASIC18.63■□□□□ 0.57
ERVFC1P60507 PTCHD3P3-201ENST00000403073 906 ntBASIC18.63■□□□□ 0.57
ERVFC1P60507 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.63■□□□□ 0.57
ERVFC1P60507 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERVFC1P60507 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.63■□□□□ 0.57
ERVFC1P60507 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.63■□□□□ 0.57
ERVFC1P60507 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.63■□□□□ 0.57
ERVFC1P60507 PDPK2P-202ENST00000562415 1191 ntBASIC18.63■□□□□ 0.57
ERVFC1P60507 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERVFC1P60507 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.63■□□□□ 0.57
ERVFC1P60507 AC010654.1-201ENST00000615722 808 ntBASIC18.63■□□□□ 0.57
ERVFC1P60507 AC010507.1-201ENST00000633895 436 ntBASIC18.63■□□□□ 0.57
ERVFC1P60507 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERVFC1P60507 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ERVFC1P60507 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.63■□□□□ 0.57
ERVFC1P60507 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.63■□□□□ 0.57
ERVFC1P60507 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.63■□□□□ 0.57
ERVFC1P60507 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERVFC1P60507 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.62■□□□□ 0.57
ERVFC1P60507 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERVFC1P60507 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERVFC1P60507 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.62■□□□□ 0.57
ERVFC1P60507 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ERVFC1P60507 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.62■□□□□ 0.57
ERVFC1P60507 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
ERVFC1P60507 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.62■□□□□ 0.57
ERVFC1P60507 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.62■□□□□ 0.57
ERVFC1P60507 OR7E47P-204ENST00000575924 449 ntBASIC18.62■□□□□ 0.57
ERVFC1P60507 AC027612.4-201ENST00000605371 583 ntBASIC18.62■□□□□ 0.57
ERVFC1P60507 AC106028.4-201ENST00000614509 607 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms