Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.28□□□□□ -0.28
CMC4P56277 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.28□□□□□ -0.28
CMC4P56277 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CMC4P56277 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CMC4P56277 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CMC4P56277 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CMC4P56277 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CMC4P56277 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
CMC4P56277 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CMC4P56277 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
CMC4P56277 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.27□□□□□ -0.28
CMC4P56277 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CMC4P56277 AC009113.1-201ENST00000570267 2443 ntBASIC13.27□□□□□ -0.29
CMC4P56277 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CMC4P56277 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.27□□□□□ -0.29
CMC4P56277 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.27□□□□□ -0.29
CMC4P56277 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.27□□□□□ -0.29
CMC4P56277 AC122714.2-201ENST00000502787 707 ntBASIC13.27□□□□□ -0.29
CMC4P56277 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.27□□□□□ -0.29
CMC4P56277 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.27□□□□□ -0.29
CMC4P56277 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.27□□□□□ -0.29
CMC4P56277 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CMC4P56277 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.27□□□□□ -0.29
CMC4P56277 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.27□□□□□ -0.29
CMC4P56277 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.27□□□□□ -0.29
CMC4P56277 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 FER1L4-210ENST00000615531 5998 ntBASIC13.27□□□□□ -0.29
CMC4P56277 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.27□□□□□ -0.29
CMC4P56277 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.27□□□□□ -0.29
CMC4P56277 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CMC4P56277 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.26□□□□□ -0.29
CMC4P56277 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
CMC4P56277 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.26□□□□□ -0.29
CMC4P56277 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
CMC4P56277 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CMC4P56277 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 COX5BP2-201ENST00000392354 334 ntBASIC13.26□□□□□ -0.29
CMC4P56277 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.26□□□□□ -0.29
CMC4P56277 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
CMC4P56277 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 NSUN5P1-202ENST00000421140 1535 ntBASIC13.26□□□□□ -0.29
CMC4P56277 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.26□□□□□ -0.29
CMC4P56277 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CMC4P56277 NSUN5P2-203ENST00000457352 1529 ntBASIC13.26□□□□□ -0.29
CMC4P56277 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.26□□□□□ -0.29
CMC4P56277 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.26□□□□□ -0.29
CMC4P56277 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.26□□□□□ -0.29
CMC4P56277 PRELID1P1-202ENST00000567272 903 ntBASIC13.26□□□□□ -0.29
CMC4P56277 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.26□□□□□ -0.29
CMC4P56277 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CMC4P56277 AL138831.2-201ENST00000606564 490 ntBASIC13.26□□□□□ -0.29
CMC4P56277 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.26□□□□□ -0.29
CMC4P56277 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.26□□□□□ -0.29
CMC4P56277 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.26□□□□□ -0.29
CMC4P56277 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CMC4P56277 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CMC4P56277 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CMC4P56277 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.25□□□□□ -0.29
CMC4P56277 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.25□□□□□ -0.29
CMC4P56277 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CMC4P56277 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms