Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PDE1AP54750 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.74■■□□□ 1.07
PDE1AP54750 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDE1AP54750 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE1AP54750 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDE1AP54750 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDE1AP54750 BX276092.5-203ENST00000456199 560 ntBASIC21.74■■□□□ 1.07
PDE1AP54750 AC091607.1-201ENST00000490318 1060 ntBASIC21.74■■□□□ 1.07
PDE1AP54750 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.74■■□□□ 1.07
PDE1AP54750 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.74■■□□□ 1.07
PDE1AP54750 AL121672.3-201ENST00000608644 468 ntBASIC21.74■■□□□ 1.07
PDE1AP54750 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.74■■□□□ 1.07
PDE1AP54750 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE1AP54750 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PDE1AP54750 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PDE1AP54750 FZD10-202ENST00000539839 3282 ntBASIC21.74■■□□□ 1.07
PDE1AP54750 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.74■■□□□ 1.07
PDE1AP54750 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.74■■□□□ 1.07
PDE1AP54750 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE1AP54750 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE1AP54750 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.73■■□□□ 1.07
PDE1AP54750 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE1AP54750 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.73■■□□□ 1.07
PDE1AP54750 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDE1AP54750 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE1AP54750 AC125634.1-201ENST00000438758 1403 ntBASIC21.73■■□□□ 1.07
PDE1AP54750 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE1AP54750 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE1AP54750 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE1AP54750 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.73■■□□□ 1.07
PDE1AP54750 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE1AP54750 CHCHD2P8-201ENST00000429873 447 ntBASIC21.73■■□□□ 1.07
PDE1AP54750 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.73■■□□□ 1.07
PDE1AP54750 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDE1AP54750 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE1AP54750 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PDE1AP54750 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDE1AP54750 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.73■■□□□ 1.07
PDE1AP54750 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.73■■□□□ 1.07
PDE1AP54750 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE1AP54750 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PDE1AP54750 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.73■■□□□ 1.07
PDE1AP54750 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.73■■□□□ 1.07
PDE1AP54750 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDE1AP54750 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PDE1AP54750 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.73■■□□□ 1.07
PDE1AP54750 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.72■■□□□ 1.07
PDE1AP54750 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.72■■□□□ 1.07
PDE1AP54750 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PDE1AP54750 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PDE1AP54750 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.72■■□□□ 1.07
PDE1AP54750 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
PDE1AP54750 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.72■■□□□ 1.07
PDE1AP54750 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 AC005104.2-201ENST00000427818 678 ntBASIC21.72■■□□□ 1.07
PDE1AP54750 AP002383.4-201ENST00000442518 975 ntBASIC21.72■■□□□ 1.07
PDE1AP54750 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.72■■□□□ 1.07
PDE1AP54750 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.72■■□□□ 1.07
PDE1AP54750 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.72■■□□□ 1.07
PDE1AP54750 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.72■■□□□ 1.07
PDE1AP54750 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.72■■□□□ 1.07
PDE1AP54750 AL445228.2-201ENST00000605589 952 ntBASIC21.72■■□□□ 1.07
PDE1AP54750 AL138688.1-201ENST00000624851 1594 ntBASIC21.72■■□□□ 1.07
PDE1AP54750 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PDE1AP54750 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PDE1AP54750 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PDE1AP54750 IER3-202ENST00000376377 1350 ntBASIC21.72■■□□□ 1.07
PDE1AP54750 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDE1AP54750 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PDE1AP54750 SIRPAP1-201ENST00000448467 1770 ntBASIC21.71■■□□□ 1.07
PDE1AP54750 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE1AP54750 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE1AP54750 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE1AP54750 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.71■■□□□ 1.07
PDE1AP54750 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDE1AP54750 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.71■■□□□ 1.07
PDE1AP54750 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.71■■□□□ 1.07
PDE1AP54750 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE1AP54750 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.71■■□□□ 1.07
PDE1AP54750 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PDE1AP54750 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PDE1AP54750 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PDE1AP54750 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PDE1AP54750 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms