Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.94■□□□□ 0.78
LBX1P52954 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LBX1P52954 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.94■□□□□ 0.78
LBX1P52954 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
LBX1P52954 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LBX1P52954 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LBX1P52954 RN7SL752P-201ENST00000463779 287 ntBASIC19.94■□□□□ 0.78
LBX1P52954 API5-211ENST00000534695 560 ntTSL 5 BASIC19.94■□□□□ 0.78
LBX1P52954 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LBX1P52954 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.94■□□□□ 0.78
LBX1P52954 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.94■□□□□ 0.78
LBX1P52954 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.94■□□□□ 0.78
LBX1P52954 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
LBX1P52954 MYLKP1-201ENST00000509077 1580 ntBASIC19.94■□□□□ 0.78
LBX1P52954 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
LBX1P52954 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LBX1P52954 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.94■□□□□ 0.78
LBX1P52954 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LBX1P52954 AC099778.1-201ENST00000568593 1911 ntBASIC19.94■□□□□ 0.78
LBX1P52954 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LBX1P52954 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
LBX1P52954 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LBX1P52954 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
LBX1P52954 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LBX1P52954 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LBX1P52954 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LBX1P52954 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LBX1P52954 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LBX1P52954 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
LBX1P52954 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LBX1P52954 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.93■□□□□ 0.78
LBX1P52954 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.93■□□□□ 0.78
LBX1P52954 LINC01225-203ENST00000563550 1244 ntBASIC19.93■□□□□ 0.78
LBX1P52954 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LBX1P52954 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LBX1P52954 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LBX1P52954 KRT8P44-201ENST00000441609 1350 ntBASIC19.93■□□□□ 0.78
LBX1P52954 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LBX1P52954 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LBX1P52954 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.93■□□□□ 0.78
LBX1P52954 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LBX1P52954 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.92■□□□□ 0.78
LBX1P52954 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LBX1P52954 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
LBX1P52954 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LBX1P52954 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LBX1P52954 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LBX1P52954 DGCR5-201ENST00000399539 862 ntBASIC19.92■□□□□ 0.78
LBX1P52954 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.92■□□□□ 0.78
LBX1P52954 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LBX1P52954 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LBX1P52954 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.92■□□□□ 0.78
LBX1P52954 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LBX1P52954 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LBX1P52954 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.92■□□□□ 0.78
LBX1P52954 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.92■□□□□ 0.78
LBX1P52954 AC019129.2-201ENST00000609837 1235 ntBASIC19.92■□□□□ 0.78
LBX1P52954 AC003101.2-201ENST00000612557 442 ntBASIC19.92■□□□□ 0.78
LBX1P52954 AC073592.8-201ENST00000624126 511 ntBASIC19.92■□□□□ 0.78
LBX1P52954 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.92■□□□□ 0.78
LBX1P52954 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LBX1P52954 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LBX1P52954 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LBX1P52954 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.92■□□□□ 0.78
LBX1P52954 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LBX1P52954 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LBX1P52954 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.92■□□□□ 0.78
LBX1P52954 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LBX1P52954 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LBX1P52954 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.92■□□□□ 0.78
LBX1P52954 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LBX1P52954 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LBX1P52954 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LBX1P52954 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LBX1P52954 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LBX1P52954 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LBX1P52954 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LBX1P52954 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
LBX1P52954 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LBX1P52954 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LBX1P52954 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LBX1P52954 LINC00982-205ENST00000420957 435 ntBASIC19.91■□□□□ 0.78
LBX1P52954 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LBX1P52954 AC104794.3-201ENST00000566840 1248 ntBASIC19.91■□□□□ 0.78
LBX1P52954 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.91■□□□□ 0.78
LBX1P52954 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LBX1P52954 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LBX1P52954 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LBX1P52954 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LBX1P52954 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LBX1P52954 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.9■□□□□ 0.78
LBX1P52954 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LBX1P52954 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LBX1P52954 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LBX1P52954 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LBX1P52954 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LBX1P52954 AP006294.1-201ENST00000415407 339 ntBASIC19.9■□□□□ 0.78
LBX1P52954 AL353779.1-201ENST00000434793 351 ntBASIC19.9■□□□□ 0.78
LBX1P52954 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.9■□□□□ 0.78
LBX1P52954 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms