Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN3P51790 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CLCN3P51790 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN3P51790 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN3P51790 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN3P51790 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CLCN3P51790 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN3P51790 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN3P51790 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN3P51790 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CLCN3P51790 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCN3P51790 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CLCN3P51790 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN3P51790 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.53■□□□□ 0.72
CLCN3P51790 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN3P51790 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN3P51790 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN3P51790 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN3P51790 OR7E14P-202ENST00000530490 1290 ntBASIC19.53■□□□□ 0.72
CLCN3P51790 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCN3P51790 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.53■□□□□ 0.72
CLCN3P51790 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN3P51790 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CLCN3P51790 AC073592.5-201ENST00000624854 528 ntBASIC19.53■□□□□ 0.72
CLCN3P51790 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN3P51790 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CLCN3P51790 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CLCN3P51790 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCN3P51790 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CLCN3P51790 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN3P51790 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCN3P51790 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCN3P51790 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CLCN3P51790 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN3P51790 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN3P51790 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN3P51790 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN3P51790 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN3P51790 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCN3P51790 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.52■□□□□ 0.72
CLCN3P51790 AC103564.2-201ENST00000432853 1299 ntBASIC19.52■□□□□ 0.72
CLCN3P51790 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN3P51790 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.52■□□□□ 0.72
CLCN3P51790 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.52■□□□□ 0.72
CLCN3P51790 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCN3P51790 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCN3P51790 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN3P51790 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CLCN3P51790 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLCN3P51790 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLCN3P51790 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLCN3P51790 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.52■□□□□ 0.71
CLCN3P51790 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLCN3P51790 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN3P51790 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCN3P51790 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCN3P51790 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN3P51790 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.51■□□□□ 0.71
CLCN3P51790 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN3P51790 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN3P51790 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN3P51790 RPS2P28-201ENST00000314255 741 ntBASIC19.51■□□□□ 0.71
CLCN3P51790 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.51■□□□□ 0.71
CLCN3P51790 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.51■□□□□ 0.71
CLCN3P51790 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCN3P51790 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.51■□□□□ 0.71
CLCN3P51790 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN3P51790 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN3P51790 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CLCN3P51790 AL049757.1-201ENST00000616842 1596 ntBASIC19.51■□□□□ 0.71
CLCN3P51790 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCN3P51790 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN3P51790 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN3P51790 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN3P51790 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CLCN3P51790 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CLCN3P51790 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN3P51790 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCN3P51790 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CLCN3P51790 SPDYE21P-201ENST00000413323 827 ntBASIC19.5■□□□□ 0.71
CLCN3P51790 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN3P51790 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCN3P51790 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.5■□□□□ 0.71
CLCN3P51790 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN3P51790 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CLCN3P51790 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCN3P51790 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.5■□□□□ 0.71
CLCN3P51790 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN3P51790 AC116407.2-201ENST00000613639 860 ntBASIC19.5■□□□□ 0.71
CLCN3P51790 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN3P51790 AC073592.4-201ENST00000623827 446 ntBASIC19.5■□□□□ 0.71
CLCN3P51790 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLCN3P51790 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN3P51790 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLCN3P51790 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN3P51790 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN3P51790 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLCN3P51790 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CLCN3P51790 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLCN3P51790 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms