Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6CP51160 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.27■□□□□ 0.68
PDE6CP51160 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6CP51160 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PDE6CP51160 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6CP51160 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PDE6CP51160 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6CP51160 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6CP51160 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6CP51160 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6CP51160 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6CP51160 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
PDE6CP51160 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.27■□□□□ 0.68
PDE6CP51160 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.27■□□□□ 0.68
PDE6CP51160 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.27■□□□□ 0.68
PDE6CP51160 NPAP1P7-201ENST00000613027 823 ntBASIC19.27■□□□□ 0.68
PDE6CP51160 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PDE6CP51160 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
PDE6CP51160 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6CP51160 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
PDE6CP51160 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PDE6CP51160 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.27■□□□□ 0.68
PDE6CP51160 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.27■□□□□ 0.68
PDE6CP51160 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6CP51160 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDE6CP51160 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDE6CP51160 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.27■□□□□ 0.67
PDE6CP51160 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDE6CP51160 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDE6CP51160 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.27■□□□□ 0.67
PDE6CP51160 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.26■□□□□ 0.67
PDE6CP51160 AC022898.2-201ENST00000616822 1312 ntBASIC19.26■□□□□ 0.67
PDE6CP51160 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDE6CP51160 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.26■□□□□ 0.67
PDE6CP51160 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6CP51160 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6CP51160 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PDE6CP51160 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6CP51160 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
PDE6CP51160 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6CP51160 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6CP51160 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.26■□□□□ 0.67
PDE6CP51160 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.26■□□□□ 0.67
PDE6CP51160 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PDE6CP51160 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6CP51160 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6CP51160 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6CP51160 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDE6CP51160 CHCHD2P8-201ENST00000429873 447 ntBASIC19.26■□□□□ 0.67
PDE6CP51160 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.26■□□□□ 0.67
PDE6CP51160 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.26■□□□□ 0.67
PDE6CP51160 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.26■□□□□ 0.67
PDE6CP51160 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.26■□□□□ 0.67
PDE6CP51160 AC092329.2-201ENST00000598402 547 ntBASIC19.26■□□□□ 0.67
PDE6CP51160 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6CP51160 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6CP51160 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6CP51160 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PDE6CP51160 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6CP51160 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PDE6CP51160 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6CP51160 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6CP51160 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PDE6CP51160 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PDE6CP51160 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE6CP51160 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.25■□□□□ 0.67
PDE6CP51160 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.25■□□□□ 0.67
PDE6CP51160 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.25■□□□□ 0.67
PDE6CP51160 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDE6CP51160 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE6CP51160 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.25■□□□□ 0.67
PDE6CP51160 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE6CP51160 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.25■□□□□ 0.67
PDE6CP51160 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 TSPY22P-201ENST00000427496 604 ntBASIC19.25■□□□□ 0.67
PDE6CP51160 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE6CP51160 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.25■□□□□ 0.67
PDE6CP51160 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE6CP51160 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.25■□□□□ 0.67
PDE6CP51160 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6CP51160 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms