Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRIM2P49643 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRIM2P49643 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PRIM2P49643 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRIM2P49643 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRIM2P49643 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PRIM2P49643 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
PRIM2P49643 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRIM2P49643 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PRIM2P49643 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRIM2P49643 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRIM2P49643 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PRIM2P49643 PVRIG2P-201ENST00000435460 978 ntBASIC16.98■□□□□ 0.31
PRIM2P49643 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.98■□□□□ 0.31
PRIM2P49643 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.98■□□□□ 0.31
PRIM2P49643 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.98■□□□□ 0.31
PRIM2P49643 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.98■□□□□ 0.31
PRIM2P49643 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRIM2P49643 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRIM2P49643 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRIM2P49643 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRIM2P49643 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRIM2P49643 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRIM2P49643 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRIM2P49643 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.98■□□□□ 0.31
PRIM2P49643 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.97■□□□□ 0.31
PRIM2P49643 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.97■□□□□ 0.31
PRIM2P49643 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.97■□□□□ 0.31
PRIM2P49643 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.97■□□□□ 0.31
PRIM2P49643 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PRIM2P49643 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.97■□□□□ 0.31
PRIM2P49643 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.97■□□□□ 0.31
PRIM2P49643 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.97■□□□□ 0.31
PRIM2P49643 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 AC113347.1-201ENST00000413321 391 ntBASIC16.97■□□□□ 0.31
PRIM2P49643 AL137013.1-201ENST00000432946 1228 ntBASIC16.97■□□□□ 0.31
PRIM2P49643 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PRIM2P49643 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.97■□□□□ 0.31
PRIM2P49643 AC010203.1-204ENST00000548782 407 ntBASIC16.97■□□□□ 0.31
PRIM2P49643 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PRIM2P49643 AL157888.1-201ENST00000631930 593 ntBASIC16.97■□□□□ 0.31
PRIM2P49643 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.97■□□□□ 0.31
PRIM2P49643 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PRIM2P49643 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.97■□□□□ 0.31
PRIM2P49643 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.97■□□□□ 0.31
PRIM2P49643 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
PRIM2P49643 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRIM2P49643 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PRIM2P49643 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PRIM2P49643 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRIM2P49643 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PRIM2P49643 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRIM2P49643 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PRIM2P49643 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRIM2P49643 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.96■□□□□ 0.31
PRIM2P49643 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRIM2P49643 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRIM2P49643 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.96■□□□□ 0.31
PRIM2P49643 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRIM2P49643 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.96■□□□□ 0.31
PRIM2P49643 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PRIM2P49643 COX11P1-201ENST00000489116 835 ntBASIC16.96■□□□□ 0.31
PRIM2P49643 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.96■□□□□ 0.31
PRIM2P49643 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PRIM2P49643 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.96■□□□□ 0.31
PRIM2P49643 GCSHP2-201ENST00000560971 527 ntBASIC16.96■□□□□ 0.31
PRIM2P49643 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.96■□□□□ 0.31
PRIM2P49643 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PRIM2P49643 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PRIM2P49643 AL023973.1-201ENST00000624619 620 ntBASIC16.96■□□□□ 0.31
PRIM2P49643 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRIM2P49643 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PRIM2P49643 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRIM2P49643 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRIM2P49643 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.96■□□□□ 0.31
PRIM2P49643 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.96■□□□□ 0.31
PRIM2P49643 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PRIM2P49643 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRIM2P49643 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.96■□□□□ 0.3
PRIM2P49643 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRIM2P49643 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRIM2P49643 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms