Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPFP49454 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CENPFP49454 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPFP49454 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPFP49454 AL627223.1-201ENST00000416693 442 ntBASIC19.95■□□□□ 0.78
CENPFP49454 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.95■□□□□ 0.78
CENPFP49454 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CENPFP49454 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.95■□□□□ 0.78
CENPFP49454 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.95■□□□□ 0.78
CENPFP49454 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CENPFP49454 AC025048.6-201ENST00000634326 1161 ntBASIC19.95■□□□□ 0.78
CENPFP49454 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.95■□□□□ 0.78
CENPFP49454 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPFP49454 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.95■□□□□ 0.78
CENPFP49454 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPFP49454 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.95■□□□□ 0.78
CENPFP49454 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPFP49454 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPFP49454 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.95■□□□□ 0.78
CENPFP49454 PMS2P4-201ENST00000412466 1052 ntBASIC19.95■□□□□ 0.78
CENPFP49454 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.95■□□□□ 0.78
CENPFP49454 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CENPFP49454 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPFP49454 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CENPFP49454 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.94■□□□□ 0.78
CENPFP49454 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.94■□□□□ 0.78
CENPFP49454 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.94■□□□□ 0.78
CENPFP49454 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CENPFP49454 AL121761.2-201ENST00000598007 1648 ntBASIC19.94■□□□□ 0.78
CENPFP49454 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CENPFP49454 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CENPFP49454 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CENPFP49454 TSPY16P-201ENST00000449843 468 ntBASIC19.94■□□□□ 0.78
CENPFP49454 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CENPFP49454 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.94■□□□□ 0.78
CENPFP49454 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CENPFP49454 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CENPFP49454 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CENPFP49454 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CENPFP49454 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CENPFP49454 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CENPFP49454 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
CENPFP49454 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.93■□□□□ 0.78
CENPFP49454 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 FAM207CP-201ENST00000443486 507 ntBASIC19.93■□□□□ 0.78
CENPFP49454 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.93■□□□□ 0.78
CENPFP49454 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.93■□□□□ 0.78
CENPFP49454 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.93■□□□□ 0.78
CENPFP49454 AL606495.2-201ENST00000605867 535 ntBASIC19.93■□□□□ 0.78
CENPFP49454 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.93■□□□□ 0.78
CENPFP49454 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.93■□□□□ 0.78
CENPFP49454 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.93■□□□□ 0.78
CENPFP49454 CRB3P1-201ENST00000449338 276 ntBASIC19.93■□□□□ 0.78
CENPFP49454 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CENPFP49454 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
CENPFP49454 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.93■□□□□ 0.78
CENPFP49454 AC009093.7-201ENST00000623853 1223 ntBASIC19.93■□□□□ 0.78
CENPFP49454 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CENPFP49454 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.93■□□□□ 0.78
CENPFP49454 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 AC055876.3-201ENST00000431496 288 ntBASIC19.93■□□□□ 0.78
CENPFP49454 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.93■□□□□ 0.78
CENPFP49454 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CENPFP49454 AC138649.4-201ENST00000612222 287 ntBASIC19.93■□□□□ 0.78
CENPFP49454 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CENPFP49454 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CENPFP49454 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CENPFP49454 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CENPFP49454 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.92■□□□□ 0.78
CENPFP49454 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.92■□□□□ 0.78
CENPFP49454 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.92■□□□□ 0.78
CENPFP49454 AC022494.1-201ENST00000466044 728 ntBASIC19.92■□□□□ 0.78
CENPFP49454 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.92■□□□□ 0.78
CENPFP49454 AC004449.1-201ENST00000564240 433 ntBASIC19.92■□□□□ 0.78
CENPFP49454 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CENPFP49454 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.92■□□□□ 0.78
CENPFP49454 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.92■□□□□ 0.78
CENPFP49454 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CENPFP49454 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.92■□□□□ 0.78
CENPFP49454 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.92■□□□□ 0.78
CENPFP49454 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
CENPFP49454 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.92■□□□□ 0.78
CENPFP49454 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CENPFP49454 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CENPFP49454 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CENPFP49454 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms