Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6CP48668 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6CP48668 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6CP48668 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6CP48668 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6CP48668 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6CP48668 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
KRT6CP48668 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT6CP48668 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6CP48668 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT6CP48668 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.3■□□□□ 0.36
KRT6CP48668 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.3■□□□□ 0.36
KRT6CP48668 AL136038.4-201ENST00000603606 1261 ntBASIC17.3■□□□□ 0.36
KRT6CP48668 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6CP48668 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6CP48668 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6CP48668 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT6CP48668 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT6CP48668 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT6CP48668 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
KRT6CP48668 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6CP48668 AL355312.1-201ENST00000407115 2176 ntBASIC17.29■□□□□ 0.36
KRT6CP48668 AL391807.1-203ENST00000604392 2365 ntBASIC17.29■□□□□ 0.36
KRT6CP48668 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6CP48668 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6CP48668 AC010203.1-204ENST00000548782 407 ntBASIC17.29■□□□□ 0.36
KRT6CP48668 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT6CP48668 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.29■□□□□ 0.36
KRT6CP48668 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6CP48668 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6CP48668 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6CP48668 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.29■□□□□ 0.36
KRT6CP48668 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT6CP48668 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT6CP48668 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6CP48668 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6CP48668 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT6CP48668 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
KRT6CP48668 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT6CP48668 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6CP48668 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
KRT6CP48668 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
KRT6CP48668 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6CP48668 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
KRT6CP48668 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6CP48668 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
KRT6CP48668 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6CP48668 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6CP48668 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6CP48668 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT6CP48668 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT6CP48668 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6CP48668 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6CP48668 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
KRT6CP48668 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6CP48668 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT6CP48668 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT6CP48668 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6CP48668 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6CP48668 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6CP48668 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT6CP48668 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
KRT6CP48668 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT6CP48668 AC005363.2-201ENST00000618631 242 ntBASIC17.28■□□□□ 0.36
KRT6CP48668 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT6CP48668 AC133963.1-201ENST00000504166 1679 ntBASIC17.28■□□□□ 0.36
KRT6CP48668 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6CP48668 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
KRT6CP48668 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6CP48668 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6CP48668 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT6CP48668 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6CP48668 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT6CP48668 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6CP48668 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT6CP48668 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6CP48668 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT6CP48668 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6CP48668 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6CP48668 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.27■□□□□ 0.36
KRT6CP48668 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT6CP48668 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
KRT6CP48668 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6CP48668 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6CP48668 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.27■□□□□ 0.36
KRT6CP48668 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6CP48668 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6CP48668 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6CP48668 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6CP48668 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.27■□□□□ 0.36
KRT6CP48668 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT6CP48668 FAM8A6P-201ENST00000407496 1135 ntBASIC17.27■□□□□ 0.36
KRT6CP48668 AL137013.1-201ENST00000432946 1228 ntBASIC17.27■□□□□ 0.36
KRT6CP48668 KRT18P48-201ENST00000434763 852 ntBASIC17.27■□□□□ 0.36
KRT6CP48668 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.27■□□□□ 0.36
KRT6CP48668 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6CP48668 BX664615.1-201ENST00000443558 458 ntBASIC17.27■□□□□ 0.36
KRT6CP48668 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.27■□□□□ 0.36
KRT6CP48668 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT6CP48668 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms