Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
HMGCLP35914 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
HMGCLP35914 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
HMGCLP35914 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HMGCLP35914 COX5BP2-201ENST00000392354 334 ntBASIC17.74■□□□□ 0.43
HMGCLP35914 HCG4P8-203ENST00000443049 980 ntBASIC17.74■□□□□ 0.43
HMGCLP35914 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 AC104819.1-201ENST00000504587 486 ntBASIC17.74■□□□□ 0.43
HMGCLP35914 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.74■□□□□ 0.43
HMGCLP35914 AC074051.2-201ENST00000565115 352 ntBASIC17.74■□□□□ 0.43
HMGCLP35914 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.74■□□□□ 0.43
HMGCLP35914 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.74■□□□□ 0.43
HMGCLP35914 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.74■□□□□ 0.43
HMGCLP35914 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HMGCLP35914 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.73■□□□□ 0.43
HMGCLP35914 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HMGCLP35914 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
HMGCLP35914 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.73■□□□□ 0.43
HMGCLP35914 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HMGCLP35914 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
HMGCLP35914 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.73■□□□□ 0.43
HMGCLP35914 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.73■□□□□ 0.43
HMGCLP35914 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 MINOS1P3-201ENST00000457048 203 ntBASIC17.73■□□□□ 0.43
HMGCLP35914 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.73■□□□□ 0.43
HMGCLP35914 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.73■□□□□ 0.43
HMGCLP35914 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.73■□□□□ 0.43
HMGCLP35914 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.73■□□□□ 0.43
HMGCLP35914 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HMGCLP35914 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.73■□□□□ 0.43
HMGCLP35914 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCLP35914 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGCLP35914 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HMGCLP35914 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGCLP35914 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
HMGCLP35914 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGCLP35914 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HMGCLP35914 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
HMGCLP35914 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.72■□□□□ 0.43
HMGCLP35914 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
HMGCLP35914 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.72■□□□□ 0.43
HMGCLP35914 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.72■□□□□ 0.43
HMGCLP35914 BNIP3P18-201ENST00000593976 575 ntBASIC17.72■□□□□ 0.43
HMGCLP35914 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
HMGCLP35914 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HMGCLP35914 REXO1L11P-201ENST00000620964 1927 ntBASIC17.72■□□□□ 0.43
HMGCLP35914 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.72■□□□□ 0.43
HMGCLP35914 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGCLP35914 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLP35914 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.72■□□□□ 0.43
HMGCLP35914 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLP35914 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HMGCLP35914 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGCLP35914 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLP35914 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGCLP35914 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLP35914 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLP35914 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLP35914 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms