Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFRAP16234 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PDGFRAP16234 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PDGFRAP16234 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PDGFRAP16234 TSSC2-201ENST00000450217 709 ntBASIC18.71■□□□□ 0.59
PDGFRAP16234 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.71■□□□□ 0.59
PDGFRAP16234 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
PDGFRAP16234 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.71■□□□□ 0.59
PDGFRAP16234 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PDGFRAP16234 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.71■□□□□ 0.59
PDGFRAP16234 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.71■□□□□ 0.59
PDGFRAP16234 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.71■□□□□ 0.59
PDGFRAP16234 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.71■□□□□ 0.59
PDGFRAP16234 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFRAP16234 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PDGFRAP16234 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PDGFRAP16234 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PDGFRAP16234 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PDGFRAP16234 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.7■□□□□ 0.58
PDGFRAP16234 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PDGFRAP16234 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.7■□□□□ 0.58
PDGFRAP16234 HCG4P8-203ENST00000443049 980 ntBASIC18.7■□□□□ 0.58
PDGFRAP16234 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
PDGFRAP16234 RN7SL606P-201ENST00000472779 293 ntBASIC18.7■□□□□ 0.58
PDGFRAP16234 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.7■□□□□ 0.58
PDGFRAP16234 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.7■□□□□ 0.58
PDGFRAP16234 AC092119.3-201ENST00000612618 583 ntBASIC18.7■□□□□ 0.58
PDGFRAP16234 IGHV3-41-201ENST00000613121 348 ntBASIC18.7■□□□□ 0.58
PDGFRAP16234 AC124864.1-201ENST00000623408 392 ntBASIC18.7■□□□□ 0.58
PDGFRAP16234 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PDGFRAP16234 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.7■□□□□ 0.58
PDGFRAP16234 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFRAP16234 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFRAP16234 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.69■□□□□ 0.58
PDGFRAP16234 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.69■□□□□ 0.58
PDGFRAP16234 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDGFRAP16234 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFRAP16234 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFRAP16234 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFRAP16234 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
PDGFRAP16234 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFRAP16234 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFRAP16234 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFRAP16234 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
PDGFRAP16234 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFRAP16234 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.69■□□□□ 0.58
PDGFRAP16234 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFRAP16234 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFRAP16234 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.69■□□□□ 0.58
PDGFRAP16234 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PDGFRAP16234 AC090616.6-201ENST00000582640 721 ntBASIC18.69■□□□□ 0.58
PDGFRAP16234 NPAP1P7-201ENST00000613027 823 ntBASIC18.69■□□□□ 0.58
PDGFRAP16234 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFRAP16234 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDGFRAP16234 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PDGFRAP16234 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.69■□□□□ 0.58
PDGFRAP16234 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFRAP16234 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFRAP16234 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDGFRAP16234 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFRAP16234 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.69■□□□□ 0.58
PDGFRAP16234 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFRAP16234 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PDGFRAP16234 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFRAP16234 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PDGFRAP16234 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PDGFRAP16234 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.68■□□□□ 0.58
PDGFRAP16234 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFRAP16234 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
PDGFRAP16234 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms