Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CYP3A4P08684 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20■□□□□ 0.79
CYP3A4P08684 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20■□□□□ 0.79
CYP3A4P08684 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CYP3A4P08684 AC073592.4-201ENST00000623827 446 ntBASIC20■□□□□ 0.79
CYP3A4P08684 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20■□□□□ 0.79
CYP3A4P08684 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CYP3A4P08684 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CYP3A4P08684 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20■□□□□ 0.79
CYP3A4P08684 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20■□□□□ 0.79
CYP3A4P08684 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CYP3A4P08684 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CYP3A4P08684 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20■□□□□ 0.79
CYP3A4P08684 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CYP3A4P08684 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CYP3A4P08684 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CYP3A4P08684 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CYP3A4P08684 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.99■□□□□ 0.79
CYP3A4P08684 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CYP3A4P08684 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.99■□□□□ 0.79
CYP3A4P08684 AP002469.2-201ENST00000531724 424 ntBASIC19.99■□□□□ 0.79
CYP3A4P08684 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.99■□□□□ 0.79
CYP3A4P08684 AC109462.3-201ENST00000573934 613 ntBASIC19.99■□□□□ 0.79
CYP3A4P08684 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CYP3A4P08684 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.99■□□□□ 0.79
CYP3A4P08684 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.99■□□□□ 0.79
CYP3A4P08684 TP73-AS1-207ENST00000624167 988 ntBASIC19.99■□□□□ 0.79
CYP3A4P08684 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CYP3A4P08684 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.99■□□□□ 0.79
CYP3A4P08684 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CYP3A4P08684 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CYP3A4P08684 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CYP3A4P08684 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CYP3A4P08684 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.99■□□□□ 0.79
CYP3A4P08684 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CYP3A4P08684 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.98■□□□□ 0.79
CYP3A4P08684 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CYP3A4P08684 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CYP3A4P08684 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CYP3A4P08684 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CYP3A4P08684 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CYP3A4P08684 AC132938.5-201ENST00000624980 1813 ntBASIC19.98■□□□□ 0.79
CYP3A4P08684 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CYP3A4P08684 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CYP3A4P08684 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CYP3A4P08684 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.98■□□□□ 0.79
CYP3A4P08684 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CYP3A4P08684 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.98■□□□□ 0.79
CYP3A4P08684 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CYP3A4P08684 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CYP3A4P08684 LINC01451-201ENST00000623792 534 ntBASIC19.98■□□□□ 0.79
CYP3A4P08684 AC073592.5-201ENST00000624854 528 ntBASIC19.98■□□□□ 0.79
CYP3A4P08684 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CYP3A4P08684 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.98■□□□□ 0.79
CYP3A4P08684 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.98■□□□□ 0.79
CYP3A4P08684 SIGLEC16-201ENST00000599858 1437 ntBASIC19.98■□□□□ 0.79
CYP3A4P08684 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CYP3A4P08684 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.98■□□□□ 0.79
CYP3A4P08684 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.98■□□□□ 0.79
CYP3A4P08684 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.98■□□□□ 0.79
CYP3A4P08684 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CYP3A4P08684 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CYP3A4P08684 AC079776.2-201ENST00000641154 1609 ntBASIC19.98■□□□□ 0.79
CYP3A4P08684 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.97■□□□□ 0.79
CYP3A4P08684 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CYP3A4P08684 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CYP3A4P08684 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CYP3A4P08684 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CYP3A4P08684 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CYP3A4P08684 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CYP3A4P08684 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CYP3A4P08684 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CYP3A4P08684 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CYP3A4P08684 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CYP3A4P08684 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CYP3A4P08684 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CYP3A4P08684 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CYP3A4P08684 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CYP3A4P08684 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CYP3A4P08684 AC026396.1-201ENST00000419388 421 ntBASIC19.97■□□□□ 0.79
CYP3A4P08684 FDX1P1-201ENST00000449115 551 ntBASIC19.97■□□□□ 0.79
CYP3A4P08684 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CYP3A4P08684 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CYP3A4P08684 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.97■□□□□ 0.79
CYP3A4P08684 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CYP3A4P08684 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.97■□□□□ 0.79
CYP3A4P08684 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.97■□□□□ 0.79
CYP3A4P08684 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.97■□□□□ 0.79
CYP3A4P08684 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.97■□□□□ 0.79
CYP3A4P08684 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CYP3A4P08684 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CYP3A4P08684 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CYP3A4P08684 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CYP3A4P08684 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CYP3A4P08684 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.96■□□□□ 0.79
CYP3A4P08684 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CYP3A4P08684 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.96■□□□□ 0.79
CYP3A4P08684 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CYP3A4P08684 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CYP3A4P08684 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms