Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DOAP06340 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
HLA-DOAP06340 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DOAP06340 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
HLA-DOAP06340 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DOAP06340 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DOAP06340 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DOAP06340 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DOAP06340 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DOAP06340 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DOAP06340 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.94■□□□□ 0.94
HLA-DOAP06340 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DOAP06340 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DOAP06340 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.94■□□□□ 0.94
HLA-DOAP06340 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.94■□□□□ 0.94
HLA-DOAP06340 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-DOAP06340 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DOAP06340 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DOAP06340 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DOAP06340 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DOAP06340 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DOAP06340 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DOAP06340 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DOAP06340 AL353593.2-201ENST00000602529 1483 ntBASIC20.94■□□□□ 0.94
HLA-DOAP06340 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
HLA-DOAP06340 AC100803.2-201ENST00000562459 1963 ntBASIC20.94■□□□□ 0.94
HLA-DOAP06340 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DOAP06340 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DOAP06340 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HLA-DOAP06340 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DOAP06340 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DOAP06340 REXO1L9P-201ENST00000604264 2108 ntBASIC20.93■□□□□ 0.94
HLA-DOAP06340 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DOAP06340 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HLA-DOAP06340 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DOAP06340 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-DOAP06340 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DOAP06340 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DOAP06340 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DOAP06340 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DOAP06340 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DOAP06340 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-DOAP06340 AL020989.1-201ENST00000422979 469 ntBASIC20.93■□□□□ 0.94
HLA-DOAP06340 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-DOAP06340 PRYP5-201ENST00000451909 266 ntBASIC20.93■□□□□ 0.94
HLA-DOAP06340 AC145285.3-201ENST00000564603 959 ntBASIC20.93■□□□□ 0.94
HLA-DOAP06340 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.93■□□□□ 0.94
HLA-DOAP06340 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DOAP06340 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.93■□□□□ 0.94
HLA-DOAP06340 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DOAP06340 AC104109.2-201ENST00000602919 1418 ntBASIC20.93■□□□□ 0.94
HLA-DOAP06340 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DOAP06340 BX276092.7-203ENST00000637198 1536 ntBASIC20.93■□□□□ 0.94
HLA-DOAP06340 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.93■□□□□ 0.94
HLA-DOAP06340 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.92■□□□□ 0.94
HLA-DOAP06340 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.92■□□□□ 0.94
HLA-DOAP06340 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.92■□□□□ 0.94
HLA-DOAP06340 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.92■□□□□ 0.94
HLA-DOAP06340 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
HLA-DOAP06340 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HLA-DOAP06340 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.92■□□□□ 0.94
HLA-DOAP06340 DDX43P3-201ENST00000441064 443 ntBASIC20.92■□□□□ 0.94
HLA-DOAP06340 POLD2P1-201ENST00000511220 997 ntBASIC20.92■□□□□ 0.94
HLA-DOAP06340 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.92■□□□□ 0.94
HLA-DOAP06340 TERC-201ENST00000602385 541 ntBASIC20.92■□□□□ 0.94
HLA-DOAP06340 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HLA-DOAP06340 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 AL049757.1-201ENST00000616842 1596 ntBASIC20.92■□□□□ 0.94
HLA-DOAP06340 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
HLA-DOAP06340 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.92■□□□□ 0.94
HLA-DOAP06340 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.92■□□□□ 0.94
HLA-DOAP06340 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.92■□□□□ 0.94
HLA-DOAP06340 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DOAP06340 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DOAP06340 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DOAP06340 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DOAP06340 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DOAP06340 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DOAP06340 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DOAP06340 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DOAP06340 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DOAP06340 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DOAP06340 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DOAP06340 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
HLA-DOAP06340 MIR940-201ENST00000401276 94 ntBASIC20.91■□□□□ 0.94
HLA-DOAP06340 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms